RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 ADGRF3Q8IZF5 1079 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 MARVELD2Q8N4S9 558 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 DNAJC22Q8N4W6 341 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 SIRT6Q8N6T7 355 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 C19orf47Q8N9M1 422 aaKnown RBP7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 ACVR1CQ8NER5 493 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 LCN9Q8WX39 176 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 MAML1Q92585 1016 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 N4BP2L2Q92802 583 aaPredicted RBP7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 VPS50Q96JG6 964 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 TIGD1Q96MW7 591 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 TRIM51Q9BSJ1 452 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 TUBGCP2Q9BSJ2 902 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 XPO4Q9C0E2 1151 aaKnown RBP7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 TFB2MQ9H5Q4 396 aaKnown RBP7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 SOX17Q9H6I2 414 aaPredicted RBP7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 ZWILCHQ9H900 591 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 MAGEE1Q9HCI5 957 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 KCNJ16Q9NPI9 418 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 FANCLQ9NW38 375 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 RBM22Q9NW64 420 aaKnown RBP eCLIP7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 IL17CQ9P0M4 197 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 ACSL5Q9ULC5 683 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 ZDHHC9Q9Y397 364 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 ASB1Q9Y576 335 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 HRH3Q9Y5N1 445 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 DOCK10Q96BY6 2186 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 A0A1B0GX78 115 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 ASPDHA6ND91 283 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 MGAT4DA6NG13 374 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 OR2AG2A6NM03 316 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 C2orf74A8MZ97 194 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 NPIPA5E9PKD4 350 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 MATN3O15232 486 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 GFPT2O94808 682 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 BMP10O95393 424 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 PIRTP0C851 137 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 PIM1P11309 404 aaPredicted RBP7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 COX6A1P12074 109 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 ACPPP15309 386 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 ZNF16P17020 682 aaPredicted RBP7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 DPYSL2Q16555 572 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 ATP13A4Q4VNC1 1196 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 TXNRD3NBQ6F5E7 133 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 HIBCHQ6NVY1 386 aaPredicted RBP7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 DCUN1D2Q6PH85 259 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 SPESP1Q6UW49 350 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 DNAJC14Q6Y2X3 702 aaPredicted RBP7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 TTLL10Q6ZVT0 673 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 NDUFAF7Q7L592 441 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 FGD2Q7Z6J4 655 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 EID3Q8N140 333 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 TAB3Q8N5C8 712 aaPredicted RBP7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 OR2L2Q8NH16 312 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 SUN3Q8TAQ9 357 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 GDAP1Q8TB36 358 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 DTX3LQ8TDB6 740 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 ASB5Q8WWX0 329 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 HDAC10Q969S8 669 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.01□□□□□ -1.295e-7■■■■■ 52.3
SPTLC1-205ENST00000477888 C8orf44Q96CB5 159 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 RMND5BQ96G75 393 aaPredicted RBP7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 RMDN2Q96LZ7 410 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 TTC25Q96NG3 672 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 CSPG4P5Q96PW8 444 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 TRIB3Q96RU7 358 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 ADGRE3Q9BY15 652 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 TSPAN10Q9H1Z9 355 aaPredicted RBP7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 CLEC4MQ9H2X3 399 aaPredicted RBP7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 NDST4Q9H3R1 872 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 RASSF1Q9NS23 344 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 SEPT11Q9NVA2 429 aaKnown RBP7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 ACTR10Q9NZ32 417 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 STMN3Q9NZ72 180 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 CTSFQ9UBX1 484 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 AMACRQ9UHK6 382 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 NXT1Q9UKK6 140 aaKnown RBP7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 MKL2Q9ULH7 1088 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 NPIPA1Q9UND3 350 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 EDARQ9UNE0 448 aa7.01□□□□□ -1.29
SPTLC1-205ENST00000477888 MXRA5Q9NR99 2828 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 PCM1Q15154 2024 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 FAM237BA0A1B0GVD1 139 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 A0A1W2PQ72 361 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 SOWAHDA6NJG2 315 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 FAM227AF5H4B4 570 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 H3BRJ5 948 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 BIN1O00499 593 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 PRRG2O14669 202 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 MAP2K7O14733 419 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 AURKAO14965 403 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 KLK8O60259 260 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 UGT1A9O60656 530 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 MLYCDO95822 493 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 TSPAN12O95859 305 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 HLA-DQB2P05538 268 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 TPOP07202 933 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 CELA2AP08217 269 aa7□□□□□ -1.29
SPTLC1-205ENST00000477888 ABOP16442 354 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms