RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 HOXC6P09630 235 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 GOT1P17174 413 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 PAMP19021 973 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 ALAS2P22557 587 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 WEE1P30291 646 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 ARHGDIAP52565 204 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 BLVRAP53004 296 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 AP1S2P56377 157 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 IRF3Q14653 427 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 HKDC1Q2TB90 917 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 COL28A1Q2UY09 1125 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 KDM4DQ6B0I6 523 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 PKN3Q6P5Z2 889 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 TEX261Q6UWH6 196 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 ZNF367Q7RTV3 350 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 TRMT1LQ7Z2T5 733 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 ZFAND4Q86XD8 727 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 CCNYQ8ND76 341 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 VPS37AQ8NEZ2 397 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 C9orf43Q8TAL5 461 aaPredicted RBP8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 FBXO30Q8TB52 745 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 MARC2Q969Z3 335 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 PTERQ96BW5 349 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 RHBDF1Q96CC6 855 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 RNF31Q96EP0 1072 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 Q96MT0 163 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 COL21A1Q96P44 957 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 PGLYRP2Q96PD5 576 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 MCCC1Q96RQ3 725 aaPredicted RBP8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 CATSPERBQ9H7T0 1116 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 SYNDIG1Q9H7V2 258 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 CARS2Q9HA77 564 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 FAM105AQ9NUU6 356 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 ZNF224Q9NZL3 707 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 LIMD1Q9UGP4 676 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 PHF11Q9UIL8 331 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 FBXO10Q9UK96 956 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 AGO1Q9UL18 857 aaKnown RBP8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 U3KQ87 197 aa8.85□□□□□ -0.99
SMARCE1-207ENST00000469334 FAM170BA6NMN3 283 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 C9JVG2 144 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 RGS5O15539 181 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 MAFO75444 373 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 RECQL5O94762 991 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 CDK1P06493 297 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 CYP2C8P10632 490 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 NCF1P14598 390 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 HOXB3P14651 431 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 ZP3P21754 424 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 TNFSF9P41273 254 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 RGS6P49758 472 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 TPMTP51580 245 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 PCDH1Q08174 1060 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 DBPQ10586 325 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 PRKG2Q13237 762 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 PWP1Q13610 501 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 ZNF79Q15937 498 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 NKG7Q16617 165 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 PRSS36Q5K4E3 855 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 KIAA1614Q5VZ46 1190 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 XRRA1Q6P2D8 792 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 TMEM81Q6P7N7 255 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 C19orf48Q6RUI8 117 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 PLET1Q6UQ28 207 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 TMEM179BQ7Z7N9 219 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 KLHDC8BQ8IXV7 354 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 STX19Q8N4C7 294 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 SPATA6LQ8N4H0 392 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 ZNF557Q8N988 423 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 TTC29Q8NA56 475 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 ZNF548Q8NEK5 533 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 OR2T12Q8NG77 320 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 UBA3Q8TBC4 463 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 ZNF675Q8TD23 568 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 BTN2A2Q8WVV5 523 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 ELMO1Q92556 727 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 AKAP1Q92667 903 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 KHSRPQ92945 711 aaKnown RBP eCLIP8.84□□□□□ -0.996e-7■■■■■ 30.3
SMARCE1-207ENST00000469334 PTP4A1Q93096 173 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 PHF21BQ96EK2 531 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 ZSWIM3Q96MP5 696 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 MLPHQ9BV36 600 aaPredicted RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 PRRG3Q9BZD7 231 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 MID1IP1Q9NPA3 183 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 IL1RAPQ9NPH3 570 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 ADGRE2Q9UHX3 823 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 PSORS1C1Q9UIG5 152 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 EFCAB10A6NFE3 127 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 WASH4PA8MWX3 477 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 E9PQ18 207 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 MYL12BO14950 172 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 KIAA0513O60268 411 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 WBP4O75554 376 aaKnown RBP8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 WDR47O94967 919 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 GDF11O95390 407 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 IFNA7P01567 189 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 DNTTP04053 509 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 ICAM1P05362 532 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 TPOP07202 933 aa8.84□□□□□ -0.99
SMARCE1-207ENST00000469334 RPS17P08708 135 aaKnown RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms