RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 AKT2P31751 481 aa20.5■□□□□ 0.87
TPM1-208ENST00000404484 NUDT1P36639 197 aa20.5■□□□□ 0.87
TPM1-208ENST00000404484 NUMA1Q14980 2115 aa20.5■□□□□ 0.87
TPM1-208ENST00000404484 METTL21CQ5VZV1 264 aa20.5■□□□□ 0.87
TPM1-208ENST00000404484 C11orf96Q7Z7L8 435 aa20.5■□□□□ 0.87
TPM1-208ENST00000404484 ATL1Q8WXF7 558 aa20.5■□□□□ 0.87
TPM1-208ENST00000404484 SPACA7Q96KW9 195 aa20.5■□□□□ 0.87
TPM1-208ENST00000404484 NSUN5Q96P11 429 aaKnown RBP20.5■□□□□ 0.87
TPM1-208ENST00000404484 EBF4Q9BQW3 602 aa20.5■□□□□ 0.87
TPM1-208ENST00000404484 CCDC28BQ9BUN5 200 aa20.5■□□□□ 0.87
TPM1-208ENST00000404484 SEMA4BQ9NPR2 832 aaPredicted RBP20.5■□□□□ 0.87
TPM1-208ENST00000404484 PFDN4Q9NQP4 134 aa20.5■□□□□ 0.87
TPM1-208ENST00000404484 GULP1Q9UBP9 304 aa20.5■□□□□ 0.87
TPM1-208ENST00000404484 TRIM33Q9UPN9 1127 aa20.5■□□□□ 0.87
TPM1-208ENST00000404484 ANKRD12Q6UB98 2062 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 K7EPI3 171 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 HGSO14964 777 aaPredicted RBP20.49■□□□□ 0.87
TPM1-208ENST00000404484 AZIN1O14977 448 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 TAPBPO15533 448 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 KCNJ13O60928 360 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 UBOX5O94941 541 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 ESRRBO95718 433 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 SERPINA6P08185 405 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 TSPAN8P19075 237 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 GGT5P36269 586 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 HSPA7P48741 367 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 CCR5P51681 352 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 KIAA1024LP59773 190 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 SH3BP2P78314 561 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 ABRQ12979 859 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 CDC16Q13042 620 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 GTF2H2Q13888 395 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 TBCCQ15814 346 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 FAM91A1Q658Y4 838 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 GTF2H2CQ6P1K8 395 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 LRRC70Q7Z2Q7 622 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 CLNKQ7Z7G1 428 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 C11orf74Q86VG3 221 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 FBXO15Q8NCQ5 510 aaPredicted RBP20.49■□□□□ 0.87
TPM1-208ENST00000404484 LOXL4Q96JB6 756 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 TUBB6Q9BUF5 446 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 NUF2Q9BZD4 464 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 TCF7L2Q9NQB0 619 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 CYP8B1Q9UNU6 501 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 SLC17A4Q9Y2C5 497 aa20.49■□□□□ 0.87
TPM1-208ENST00000404484 IGHV1OR15-9A0A0B4J2B8 117 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 FCHO1O14526 889 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 TOR1BO14657 336 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 MAP3K13O43283 966 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 LATO43561 262 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 STK16O75716 305 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 CHEK2O96017 543 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 OTCP00480 354 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 TGM1P22735 817 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 INHBCP55103 352 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 PDCD2Q16342 344 aaPredicted RBP20.48■□□□□ 0.87
TPM1-208ENST00000404484 GALNTL6Q49A17 601 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 PMS2CLQ68D20 193 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 GPRIN3Q6ZVF9 776 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 CFAP61Q8NHU2 1237 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 FBXL8Q96CD0 374 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 CCDC138Q96M89 665 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 TMEM79Q9BSE2 394 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 TIMM29Q9BSF4 260 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 NUSAP1Q9BXS6 441 aaKnown RBP20.48■□□□□ 0.87
TPM1-208ENST00000404484 ACTR5Q9H9F9 607 aaPredicted RBP20.48■□□□□ 0.87
TPM1-208ENST00000404484 FZD3Q9NPG1 666 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 SAR1AQ9NR31 198 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 THADAQ6YHU6 1953 aa20.48■□□□□ 0.87
TPM1-208ENST00000404484 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 TMEM233B4DJY2 109 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 CCNT2O60583 730 aaKnown RBP20.47■□□□□ 0.87
TPM1-208ENST00000404484 KATNA1O75449 491 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 ATP5HO75947 161 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 DMPKQ09013 629 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 SPEM2Q0P670 501 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 TUBB3Q13509 450 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 PLA2G4EQ3MJ16 856 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 SLC9B1Q4ZJI4 515 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 FBXO48Q5FWF7 155 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 VWA5B1Q5TIE3 1220 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 KANK2Q63ZY3 851 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 UNC5DQ6UXZ4 953 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 GOLGA7Q7Z5G4 137 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 TMEFF1Q8IYR6 380 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 LILRA3Q8N6C8 439 aaPredicted RBP20.47■□□□□ 0.87
TPM1-208ENST00000404484 TEX9Q8N6V9 391 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 MAPK15Q8TD08 544 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 MAGEC3Q8TD91 643 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 ARRDC1-AS1Q9H2J1 176 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 ZBTB26Q9HCK0 441 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 MRGBPQ9NV56 204 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 ZNHIT2Q9UHR6 403 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 ACSL5Q9ULC5 683 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 DMTF1Q9Y222 760 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 FIS1Q9Y3D6 152 aa20.47■□□□□ 0.87
TPM1-208ENST00000404484 ARHGEF33A8MVX0 844 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 PDHA2P29803 388 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 NFE2L1Q14494 772 aa20.46■□□□□ 0.87
TPM1-208ENST00000404484 GLIPR1L2Q4G1C9 344 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms