RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 CCDC3Q9BQI4 270 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 TUBB6Q9BUF5 446 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 GATA5Q9BWX5 397 aaPredicted RBP17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 LRMDAQ9H2I8 198 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 MRPL46Q9H2W6 279 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 RAD18Q9NS91 495 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 CPSF2Q9P2I0 782 aaKnown RBP17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 XPR1Q9UBH6 696 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 MARCOQ9UEW3 520 aaPredicted RBP17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 COQ6Q9Y2Z9 468 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 VWA7Q9Y334 891 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 LRRK1Q38SD2 2015 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 PIEZO2Q9H5I5 2752 aa17.12■□□□□ 0.33
TNFSF13-205ENST00000396545 PMS2P1A4D2B8 440 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 KLK10O43240 276 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 KITP10721 976 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 C6P13671 934 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 FDXRP22570 491 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 XPAP23025 273 aaPredicted RBP17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 RBMS1P29558 406 aaKnown RBP17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 TTPAP49638 278 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 BLKP51451 505 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 HK3P52790 923 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 STC1P52823 247 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 TECRLQ5HYJ1 363 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 ZNF549Q6P9A3 640 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 CERS6Q6ZMG9 384 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 LDB1Q86U70 411 aaPredicted RBP17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 HEXDCQ8WVB3 486 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 MRPL57Q9BQC6 102 aaKnown RBP17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 POPDC3Q9HBV1 291 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 PCDH12Q9NPG4 1184 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 LNPEPQ9UIQ6 1025 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 HAO1Q9UJM8 370 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 PADI4Q9UM07 663 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 COL6A6A6NMZ7 2263 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 CDRT15L2A8MXV6 281 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 NTN3O00634 580 aaPredicted RBP17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 FCHO1O14526 889 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 ZNF195O14628 629 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 ALPIP09923 528 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 LTA4HP09960 611 aaKnown RBP17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 MMP12P39900 470 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 GLRBP48167 497 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 CDKN2DP55273 166 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 KCNJ2P63252 427 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 RHDQ02161 417 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 CACNG1Q06432 222 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 TUBB3Q13509 450 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 NFATC4Q14934 902 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 AGERQ15109 404 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 ELOCQ15369 112 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 ALG11Q2TAA5 492 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 ARHGAP40Q5TG30 622 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 LYPLAL1Q5VWZ2 237 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 FBXW10Q5XX13 1052 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 ZSWIM9Q86XI8 627 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 ARL10Q8N8L6 244 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 KYQ8NBH2 561 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 DTX3LQ8TDB6 740 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 SNRNP27Q8WVK2 155 aaKnown RBP17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 SLC7A6OSQ96CW6 309 aaPredicted RBP17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 TMEM237Q96Q45 408 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 NMUR2Q9GZQ4 415 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 DRC3Q9H069 523 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 CDH19Q9H159 772 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 SLC30A1Q9Y6M5 507 aa17.11■□□□□ 0.33
TNFSF13-205ENST00000396545 LRP4O75096 1905 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 RGSL1A5PLK6 1076 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 DLX3O60479 287 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 CBX6O95503 412 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 MC4RP32245 332 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 MLLT3P42568 568 aaPredicted RBP17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 DNAJB13P59910 316 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 ELF3P78545 371 aaPredicted RBP17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 ASPHQ12797 758 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 ARHGEF7Q14155 803 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 SPIDRQ14159 915 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 FAM83EQ2M2I3 478 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 GPR33Q49SQ1 333 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 AGAP9Q5VTM2 703 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 MAVSQ7Z434 540 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 HID1Q8IV36 788 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 WDR36Q8NI36 951 aaKnown RBP17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 TSACCQ96A04 125 aaPredicted RBP17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 PTCD3Q96EY7 689 aaKnown RBP17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 WBP1Q96G27 269 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 AARSD1Q9BTE6 412 aaKnown RBP17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 GPAMQ9HCL2 828 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 PNPOQ9NVS9 261 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 FKBPLQ9UIM3 349 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 TRIM33Q9UPN9 1127 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 OR1A2Q9Y585 309 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 COMMD10Q9Y6G5 202 aa17.1■□□□□ 0.33
TNFSF13-205ENST00000396545 NPIPB15A6NHN6 443 aaPredicted RBP17.09■□□□□ 0.33
TNFSF13-205ENST00000396545 CCDC22O60826 627 aa17.09■□□□□ 0.33
TNFSF13-205ENST00000396545 RASGRP1O95267 797 aa17.09■□□□□ 0.33
TNFSF13-205ENST00000396545 CLDN7O95471 211 aa17.09■□□□□ 0.33
TNFSF13-205ENST00000396545 HSPA4LO95757 839 aa17.09■□□□□ 0.33
TNFSF13-205ENST00000396545 HTR1BP28222 390 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms