RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 ZCCHC8Q6NZY4 707 aaKnown RBP17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 TTC23LQ6PF05 361 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 DBX2Q6ZNG2 339 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 PRR23CQ6ZRP0 262 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 GPSM1Q86YR5 675 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 TRIM48Q8IWZ4 208 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 RBM12BQ8IXT5 1001 aaKnown RBP17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 ARL10Q8N8L6 244 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 FAM181AQ8N9Y4 354 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 PHC3Q8NDX5 983 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 PATE1Q8WXA2 126 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 RAD51AP1Q96B01 352 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 FERD3LQ96RJ6 166 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 TRIM54Q9BYV2 358 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 TMEM9BQ9NQ34 198 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 XPR1Q9UBH6 696 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 RNF112Q9ULX5 631 aa17.41■□□□□ 0.38
SDCBP2-201ENST00000339987 TRBV23OR9-2A0A075B6M9 112 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 SYCE1LA8MT33 242 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 TARM1B6A8C7 271 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 MYO1CO00159 1063 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 TRIM38O00635 465 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 TM9SF1O15321 606 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 VIPP01282 170 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 PROCP04070 461 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 KCNC1P48547 511 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 KRT33BQ14525 404 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 C14orf28Q4W4Y0 310 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 CDKL4Q5MAI5 379 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 C16orf46Q6P387 395 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 FRA10AC1Q70Z53 315 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 SFTPA2Q8IWL1 248 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 ARL14Q8N4G2 192 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 TMEM151AQ8N4L1 468 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 KYQ8NBH2 561 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 TCP10LQ8TDR4 215 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 KIR3DX1Q9H7L2 352 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 SLC40A1Q9NP59 571 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 SIRPGQ9P1W8 387 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 WDFY4Q6ZS81 3184 aa17.4■□□□□ 0.38
SDCBP2-201ENST00000339987 PABPN1LA6NDY0 278 aaKnown RBP17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 TK2O00142 265 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 ZWINTO95229 277 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 HIST1H2AGP0C0S8 130 aaPredicted RBP17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 SBK3P0C264 359 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 HIST1H2ADP20671 130 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 RPIAP49247 311 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 MAZP56270 477 aaKnown RBP17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 GRB7Q14451 532 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 TGFBIQ15582 683 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 SLC35F3Q8IY50 421 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 OR9A1PQ8NGU1 263 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 HIST1H2AHQ96KK5 128 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 CAMK1GQ96NX5 476 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 HIST1H2AJQ99878 128 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 H2AFJQ9BTM1 129 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 HGH1Q9BTY7 390 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 STN1Q9H668 368 aaKnown RBP17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 UCK1Q9HA47 277 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 KCNK9Q9NPC2 374 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 NUDT4Q9NZJ9 180 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 NCKIPSDQ9NZQ3 722 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 MID2Q9UJV3 735 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 TMCO1Q9UM00 188 aa17.39■□□□□ 0.38
SDCBP2-201ENST00000339987 TMEM120BA0PK00 339 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 FLRT2O43155 660 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 KDM1AO60341 852 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 MTHFD2P13995 350 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 RPA3P35244 121 aaPredicted RBP17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 GRK6P43250 576 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 HHEXQ03014 270 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 MPP2Q14168 576 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 CCSMST1Q4G0I0 132 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 AASDHQ4L235 1098 aaPredicted RBP17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 PDPRQ8NCN5 879 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 RDH11Q8TC12 318 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 SH3KBP1Q96B97 665 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 CCDC138Q96M89 665 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 FAM111AQ96PZ2 611 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 RXFP3Q9NSD7 469 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 SPATA7Q9P0W8 599 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 CPSF2Q9P2I0 782 aaKnown RBP17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 SLC17A7Q9P2U7 560 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 ARID1BQ8NFD5 2236 aaPredicted RBP17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 PRAMEF33A0A0G2JMD5 474 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 SUPT3HB4E1H0 165 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 H3BQF6 201 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 SIGLEC6O43699 453 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 KLK8O60259 260 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 SUPT3HO75486 399 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 TPBGLP0DKB5 382 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 HSD17B2P37059 387 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 ETV4P43268 484 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 PRKG2Q13237 762 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 ASCL5Q7RTU5 278 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 EID2Q8N6I1 236 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 DENND1AQ8TEH3 1009 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 FBXL8Q96CD0 374 aa17.38■□□□□ 0.37
SDCBP2-201ENST00000339987 PHOX2BQ99453 314 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms