RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 TEX37Q96LM6 180 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 PPP3R2Q96LZ3 170 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 FARSBQ9NSD9 589 aaKnown RBP20.74■□□□□ 0.91
ATG4D-201ENST00000309469 TMEM45AQ9NWC5 275 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 ZIM2Q9NZV7 527 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 MAP10Q9P2G4 905 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 GULP1Q9UBP9 304 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 ZNF490Q9ULM2 529 aaPredicted RBP20.74■□□□□ 0.91
ATG4D-201ENST00000309469 PDHA2P29803 388 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 VHLP40337 213 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 TAS2R38P59533 333 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 UFM1P61960 85 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.74■□□□□ 0.91
ATG4D-201ENST00000309469 CACUL1Q86Y37 369 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 TRAPPC5Q8IUR0 188 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 HIPK4Q8NE63 616 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 CSGALNACT1Q8TDX6 532 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 ZNF514Q96K75 400 aaPredicted RBP20.74■□□□□ 0.91
ATG4D-201ENST00000309469 ATG10Q9H0Y0 220 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 DNAJC11Q9NVH1 559 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 ZNHIT2Q9UHR6 403 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 SLC22A14Q9Y267 594 aa20.74■□□□□ 0.91
ATG4D-201ENST00000309469 TRIM38O00635 465 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 LIN7AO14910 233 aaPredicted RBP20.73■□□□□ 0.91
ATG4D-201ENST00000309469 AP1G1O43747 822 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 VEGFDO43915 354 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 ADH1BP00325 375 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 CATP04040 527 aaKnown RBP20.73■□□□□ 0.91
ATG4D-201ENST00000309469 TIE1P35590 1138 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 LTBRP36941 435 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 KIR2DL1P43626 348 aaPredicted RBP20.73■□□□□ 0.91
ATG4D-201ENST00000309469 GTF2A1P52655 376 aaPredicted RBP20.73■□□□□ 0.91
ATG4D-201ENST00000309469 SEC13P55735 322 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 KCNK10P57789 538 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 RFTN2Q52LD8 501 aaPredicted RBP20.73■□□□□ 0.91
ATG4D-201ENST00000309469 COQ5Q5HYK3 327 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 AGBL4Q5VU57 503 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 LRRC74BQ6ZQY2 392 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 CFAP206Q8IYR0 622 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 PYDC1Q8WXC3 89 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 EZH1Q92800 747 aaPredicted RBP20.73■□□□□ 0.91
ATG4D-201ENST00000309469 USP7Q93009 1102 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 SPDL1Q96EA4 605 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 HIC2Q96JB3 615 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 SLC45A3Q96JT2 553 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 CCDC138Q96M89 665 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 ZNF576Q9H609 170 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 SPAG4Q9NPE6 437 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 MRPL40Q9NQ50 206 aaKnown RBP20.73■□□□□ 0.91
ATG4D-201ENST00000309469 REV3LO60673 3130 aa20.73■□□□□ 0.91
ATG4D-201ENST00000309469 IGLON5A6NGN9 336 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 H3BM21 787 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 KRT6AP02538 564 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 KRT6BP04259 564 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 RPSAP08865 295 aaKnown RBP20.72■□□□□ 0.91
ATG4D-201ENST00000309469 ZNF8P17098 575 aaPredicted RBP20.72■□□□□ 0.91
ATG4D-201ENST00000309469 C5AR1P21730 350 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 BMP8BP34820 402 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 MSX2P35548 267 aaPredicted RBP20.72■□□□□ 0.91
ATG4D-201ENST00000309469 ZFP36L2P47974 494 aaKnown RBP20.72■□□□□ 0.91
ATG4D-201ENST00000309469 KRT6CP48668 564 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 PFN3P60673 137 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 RCAN2Q14206 197 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 GGTA1PQ4G0N0 100 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 C2orf27AQ580R0 203 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 SGO1Q5FBB7 561 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 PLA2G15Q8NCC3 412 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 NRG4Q8WWG1 115 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 FOXJ1Q92949 421 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 MSLNLQ96KJ4 702 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 LINC00615Q96LM1 132 aaPredicted RBP20.72■□□□□ 0.91
ATG4D-201ENST00000309469 FOPNLQ96NB1 174 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 LMCD1Q9NZU5 365 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 EPS15L1Q9UBC2 864 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 MCM8Q9UJA3 840 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 GPR34Q9UPC5 381 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 LRRC42Q9Y546 428 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 A0A1W2PP18 115 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 SLC2A4P14672 509 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 ITPKAP23677 461 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 MS4A2Q01362 244 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 HTR4Q13639 388 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 TAF11Q15544 211 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 CPSF6Q16630 551 aaKnown RBP eCLIP20.72■□□□□ 0.91
ATG4D-201ENST00000309469 SMU1Q2TAY7 513 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 IL23RQ5VWK5 629 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 ADAMTSL4Q6UY14 1074 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 KBTBD6Q86V97 674 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 HDDC3Q8N4P3 179 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 ATL1Q8WXF7 558 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 TMEM181Q9P2C4 612 aa20.72■□□□□ 0.91
ATG4D-201ENST00000309469 POP7O75817 140 aaKnown RBP20.71■□□□□ 0.91
ATG4D-201ENST00000309469 PCDH8O95206 1070 aa20.71■□□□□ 0.91
ATG4D-201ENST00000309469 BAG2O95816 211 aa20.71■□□□□ 0.91
ATG4D-201ENST00000309469 G6PDP11413 515 aa20.71■□□□□ 0.91
ATG4D-201ENST00000309469 POLR2JP52435 117 aaKnown RBP20.71■□□□□ 0.91
ATG4D-201ENST00000309469 FLOT2Q14254 428 aa20.71■□□□□ 0.91
ATG4D-201ENST00000309469 CCSMST1Q4G0I0 132 aa20.71■□□□□ 0.91
ATG4D-201ENST00000309469 PNCKQ6P2M8 343 aa20.71■□□□□ 0.91
ATG4D-201ENST00000309469 ZNF547Q8IVP9 402 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms