RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 GDI1P31150 447 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 YAP1P46937 504 aaKnown RBP13.73□□□□□ -0.21
CDH3-201ENST00000264012 EIF2B2P49770 351 aaKnown RBP13.73□□□□□ -0.21
CDH3-201ENST00000264012 PRR5P85299 388 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 RING1Q06587 406 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 LGALS3BPQ08380 585 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 SLC10A2Q12908 348 aaPredicted RBP13.73□□□□□ -0.21
CDH3-201ENST00000264012 GRASPQ7Z6J2 395 aaPredicted RBP13.73□□□□□ -0.21
CDH3-201ENST00000264012 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.73□□□□□ -0.21
CDH3-201ENST00000264012 ZDHHC21Q8IVQ6 265 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 KBTBD7Q8WVZ9 684 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 NOL6Q9H6R4 1146 aaKnown RBP13.73□□□□□ -0.21
CDH3-201ENST00000264012 FANCEQ9HB96 536 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 DCLK1O15075 740 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 TYROBPO43914 113 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 FADS2O95864 444 aaKnown RBP13.72□□□□□ -0.21
CDH3-201ENST00000264012 AQP4P55087 323 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 SLBPQ14493 270 aaKnown RBP eCLIP13.72□□□□□ -0.21
CDH3-201ENST00000264012 UMODL1-AS1Q8N2C9 162 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 ZNF248Q8NDW4 579 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 DNAJB8Q8NHS0 232 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 UBASH3BQ8TF42 649 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 DERL2Q9GZP9 239 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 VPS29Q9UBQ0 182 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 LEFTY2O00292 366 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 PTGESO14684 152 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 ANGPTL1O95841 491 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 SERPINA1P01009 418 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 ZNF30P17039 623 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 ITGAXP20702 1163 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 PRPS1L1P21108 318 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 CDH12P55289 794 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 C1QTNF8P60827 252 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 RPL26P61254 145 aaKnown RBP13.72□□□□□ -0.21
CDH3-201ENST00000264012 RGS21Q2M5E4 152 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 LY6G5CQ5SRR4 150 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 DCST1Q5T197 706 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 UXS1Q8NBZ7 420 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 KIAA1191Q96A73 305 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 SMG9Q9H0W8 520 aaKnown RBP13.72□□□□□ -0.21
CDH3-201ENST00000264012 SSR3Q9UNL2 185 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 SLC22A14Q9Y267 594 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 MRPS7Q9Y2R9 242 aaKnown RBP13.72□□□□□ -0.21
CDH3-201ENST00000264012 MEIS3P2A8K0S8 358 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 E7ESA3 106 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 SAP18O00422 153 aaKnown RBP13.72□□□□□ -0.21
CDH3-201ENST00000264012 CLDN4O14493 209 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 RFPL1O75677 317 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 FESP07332 822 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 IQCF3P0C7M6 154 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 ACTR1BP42025 376 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 ATP12AP54707 1039 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 ACTR1AP61163 376 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 OLR1P78380 273 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 ZNF155Q12901 538 aaPredicted RBP13.72□□□□□ -0.21
CDH3-201ENST00000264012 FRG2Q64ET8 278 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 IZUMO1Q8IYV9 350 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 BPIFB1Q8TDL5 484 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 FRG2BQ96QU4 278 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 ZNF282Q9UDV7 671 aaPredicted RBP13.72□□□□□ -0.21
CDH3-201ENST00000264012 TESMINQ9Y4I5 508 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 MYH11P35749 1972 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 TP73O15350 636 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 RGS10O43665 173 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 IFNGP01579 166 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 C4BPBP20851 252 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 AKT2P31751 481 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 PERM1Q5SV97 790 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 EPGNQ6UW88 154 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 LRRC70Q7Z2Q7 622 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 RASSF5Q8WWW0 418 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 OLFM1Q99784 485 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 CCM2Q9BSQ5 444 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 COQ10BQ9H8M1 238 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 EBF2Q9HAK2 575 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 TMEM27Q9HBJ8 222 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 POLMQ9NP87 494 aaPredicted RBP13.72□□□□□ -0.21
CDH3-201ENST00000264012 TIMMDC1Q9NPL8 285 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 ABCB10Q9NRK6 738 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 MRTO4Q9UKD2 239 aaKnown RBP13.72□□□□□ -0.21
CDH3-201ENST00000264012 PCDHGA4Q9Y5G9 962 aa13.72□□□□□ -0.21
CDH3-201ENST00000264012 FAM86C2PA6NEL3 165 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 SAGP10523 405 aaPredicted RBP13.71□□□□□ -0.21
CDH3-201ENST00000264012 ALAS2P22557 587 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 TIE1P35590 1138 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 TRAP1Q12931 704 aaKnown RBP13.71□□□□□ -0.21
CDH3-201ENST00000264012 RNF220Q5VTB9 566 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 FAM92BQ6ZTR7 304 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 CEP68Q76N32 757 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 PLD6Q8N2A8 252 aaKnown RBP13.71□□□□□ -0.21
CDH3-201ENST00000264012 PHTF2Q8N3S3 785 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 FAM98AQ8NCA5 519 aaKnown RBP13.71□□□□□ -0.21
CDH3-201ENST00000264012 SLC38A4Q969I6 547 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 ZBED6CLQ96FA7 236 aaPredicted RBP13.71□□□□□ -0.21
CDH3-201ENST00000264012 RAB11FIP5Q9BXF6 653 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 IRS2Q9Y4H2 1338 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 PDPK1O15530 556 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 NADKO95544 446 aaPredicted RBP13.71□□□□□ -0.21
CDH3-201ENST00000264012 RAP2AP10114 183 aa13.71□□□□□ -0.21
CDH3-201ENST00000264012 MYCLP1P12525 358 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms