RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 SUV39H2Q9H5I1 410 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 IL1RAPQ9NPH3 570 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 ZNF282Q9UDV7 671 aaPredicted RBP12.59□□□□□ -0.39
SCN8A-209ENST00000627620 FAM240BA0A1B0GVZ2 78 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 DCLK1O15075 740 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 UBXN7O94888 489 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 IL7RP16871 459 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 ECT2LQ008S8 904 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 CRHR2Q13324 411 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 PLET1Q6UQ28 207 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 CPNE8Q86YQ8 564 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 ZBED6CLQ96FA7 236 aaPredicted RBP12.59□□□□□ -0.39
SCN8A-209ENST00000627620 CHCHD6Q9BRQ6 235 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 CDH7Q9ULB5 785 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 SAP18O00422 153 aaKnown RBP12.59□□□□□ -0.39
SCN8A-209ENST00000627620 WNT9AO14904 365 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 PMM2O15305 246 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 GADD45GO95257 159 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 CREB1P16220 341 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 PGDP52209 483 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 NPY5RQ15761 445 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 SMARCD3Q6STE5 483 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 SAMD14Q8IZD0 417 aaPredicted RBP12.59□□□□□ -0.39
SCN8A-209ENST00000627620 ZNF599Q96NL3 588 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 GPATCH1Q9BRR8 931 aaKnown RBP12.59□□□□□ -0.39
SCN8A-209ENST00000627620 CADM1Q9BY67 442 aaKnown RBP12.59□□□□□ -0.39
SCN8A-209ENST00000627620 DNAAF2Q9NVR5 837 aaKnown RBP12.59□□□□□ -0.39
SCN8A-209ENST00000627620 FETUBQ9UGM5 382 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 MTRF1O75570 445 aaKnown RBP12.59□□□□□ -0.39
SCN8A-209ENST00000627620 UGT1A6P19224 532 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 UGT1A1P22309 533 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 UGT1A4P22310 534 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 IL1R2P27930 398 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 UGT1A3P35503 534 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 ABATP80404 500 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 ARSIQ5FYB1 569 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 ZNF311Q5JNZ3 666 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 ADGRF1Q5T601 910 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 NCBP2-AS2Q69YL0 99 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 FAM110BQ8TC76 370 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 HTRA1Q92743 480 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 ZNF514Q96K75 400 aaPredicted RBP12.59□□□□□ -0.39
SCN8A-209ENST00000627620 CEP295NLQ96MC4 621 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 BCAS3Q9H6U6 928 aa12.59□□□□□ -0.39
SCN8A-209ENST00000627620 RBM47A0AV96 593 aaKnown RBP12.58□□□□□ -0.39
SCN8A-209ENST00000627620 CBFA2T3O75081 653 aa12.58□□□□□ -0.39
SCN8A-209ENST00000627620 PEX2P28328 305 aa12.58□□□□□ -0.39
SCN8A-209ENST00000627620 GPR33Q49SQ1 333 aa12.58□□□□□ -0.39
SCN8A-209ENST00000627620 PPP2R2DQ66LE6 453 aa12.58□□□□□ -0.39
SCN8A-209ENST00000627620 TMEM214Q6NUQ4 689 aaKnown RBP12.58□□□□□ -0.39
SCN8A-209ENST00000627620 FBXL22Q6P050 247 aa12.58□□□□□ -0.39
SCN8A-209ENST00000627620 ZCCHC12Q6PEW1 402 aa12.58□□□□□ -0.39
SCN8A-209ENST00000627620 NAPRTQ6XQN6 538 aa12.58□□□□□ -0.39
SCN8A-209ENST00000627620 MIPEPQ99797 713 aa12.58□□□□□ -0.39
SCN8A-209ENST00000627620 RAB11FIP5Q9BXF6 653 aa12.58□□□□□ -0.39
SCN8A-209ENST00000627620 BHLHE41Q9C0J9 482 aaPredicted RBP12.58□□□□□ -0.39
SCN8A-209ENST00000627620 IL36AQ9UHA7 158 aa12.58□□□□□ -0.39
SCN8A-209ENST00000627620 YIPF1Q9Y548 306 aa12.58□□□□□ -0.39
SCN8A-209ENST00000627620 TTC24A2A3L6 582 aaPredicted RBP12.58□□□□□ -0.4
SCN8A-209ENST00000627620 PIGRP01833 764 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 CBX5P45973 191 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 BLKP51451 505 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 ARHGDIBP52566 201 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 CASP9P55211 416 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 GMFBP60983 142 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 HERVK_113P63132 956 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 SLC8B1Q6J4K2 584 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 PAQR3Q6TCH7 311 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 LAPTM4BQ86VI4 370 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 OR4C6Q8NH72 309 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 NODALQ96S42 347 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 ERVK-6Q9BXR3 956 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 PIGVQ9NUD9 493 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 SLC17A6Q9P2U8 582 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 TRMUO75648 421 aaKnown RBP12.58□□□□□ -0.4
SCN8A-209ENST00000627620 MYCLP1P12525 358 aaPredicted RBP12.58□□□□□ -0.4
SCN8A-209ENST00000627620 SLC10A7Q0GE19 358 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 DLG1Q12959 904 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 TNFAIP8L2Q6P589 184 aaPredicted RBP12.58□□□□□ -0.4
SCN8A-209ENST00000627620 GDPD4Q6W3E5 623 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 CDK15Q96Q40 435 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 GPN1Q9HCN4 374 aaPredicted RBP12.58□□□□□ -0.4
SCN8A-209ENST00000627620 ZNF536O15090 1300 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.58□□□□□ -0.4
SCN8A-209ENST00000627620 FAM234BA2RU67 622 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 PCDH7O60245 1069 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 NIPSNAP2O75323 286 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 ALPIP09923 528 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 PRKCHP24723 683 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 NFKB2Q00653 900 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 KLF1Q13351 362 aaPredicted RBP12.58□□□□□ -0.4
SCN8A-209ENST00000627620 SLC9B1Q4ZJI4 515 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 CHST4Q8NCG5 386 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 GPR151Q8TDV0 419 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 SUSD3Q96L08 255 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 CCSER2Q9H7U1 834 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 MAN2B2Q9Y2E5 1009 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 IMPDH1P20839 514 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 GRK6P43250 576 aa12.58□□□□□ -0.4
SCN8A-209ENST00000627620 NCBP2P52298 156 aaKnown RBP eCLIP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms