RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 ANKRD12Q6UB98 2062 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 CNTRLQ7Z7A1 2325 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 DOCK10Q96BY6 2186 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 KLHL33A6NCF5 533 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 C3orf70A6NLC5 250 aaPredicted RBP14.19□□□□□ -0.14
PNKP-218ENST00000625299 SMTNL1A8MU46 457 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 IFRD1O00458 451 aaPredicted RBP14.19□□□□□ -0.14
PNKP-218ENST00000625299 CNOT3O75175 753 aaKnown RBP14.19□□□□□ -0.14
PNKP-218ENST00000625299 UMODP07911 640 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 H2AFZP0C0S5 128 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 PYGMP11217 842 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 TNNT1P13805 278 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 EDN3P14138 238 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 AIMP2Q13155 320 aaKnown RBP14.19□□□□□ -0.14
PNKP-218ENST00000625299 PRKG2Q13237 762 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 FIGNQ5HY92 759 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 IRAK1BP1Q5VVH5 260 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 RHBDD2Q6NTF9 364 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 H2AFVQ71UI9 128 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 ZC3H18Q86VM9 953 aaKnown RBP14.19□□□□□ -0.14
PNKP-218ENST00000625299 AMIGO1Q86WK6 493 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 ZNF655Q8N720 491 aaPredicted RBP14.19□□□□□ -0.14
PNKP-218ENST00000625299 DNAJB14Q8TBM8 379 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 HM13Q8TCT9 377 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 PROKR1Q8TCW9 393 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 PPP4R1Q8TF05 950 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 PTERQ96BW5 349 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 OXNAD1Q96HP4 312 aaPredicted RBP14.19□□□□□ -0.14
PNKP-218ENST00000625299 FSD1LQ9BXM9 530 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 IGSF5Q9NSI5 407 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 SAE1Q9UBE0 346 aaPredicted RBP14.19□□□□□ -0.14
PNKP-218ENST00000625299 COPG2Q9UBF2 871 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 FKBPLQ9UIM3 349 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 CRLS1Q9UJA2 301 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 FBXL4Q9UKA2 621 aa14.19□□□□□ -0.14
PNKP-218ENST00000625299 AGPSO00116 658 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 ZSCAN9O15535 394 aaPredicted RBP14.18□□□□□ -0.14
PNKP-218ENST00000625299 HCRTR1O43613 425 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 SGTAO43765 313 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 SRP72O76094 671 aaKnown RBP14.18□□□□□ -0.14
PNKP-218ENST00000625299 CTSBP07858 339 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 CD63P08962 238 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 RALBP11234 206 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 ZNF169Q14929 603 aaPredicted RBP14.18□□□□□ -0.14
PNKP-218ENST00000625299 PRKD1Q15139 912 aaPredicted RBP14.18□□□□□ -0.14
PNKP-218ENST00000625299 SARM1Q6SZW1 724 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 SPESP1Q6UW49 350 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 OR4K2Q8NGD2 314 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 TFB1MQ8WVM0 346 aaKnown RBP14.18□□□□□ -0.14
PNKP-218ENST00000625299 FAR1Q8WVX9 515 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 SYN2Q92777 582 aaPredicted RBP14.18□□□□□ -0.14
PNKP-218ENST00000625299 LINC00615Q96LM1 132 aaPredicted RBP14.18□□□□□ -0.14
PNKP-218ENST00000625299 AP1M1Q9BXS5 423 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 TFB2MQ9H5Q4 396 aaKnown RBP14.18□□□□□ -0.14
PNKP-218ENST00000625299 COG4Q9H9E3 785 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 SLC6A20Q9NP91 592 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 LCMT1Q9UIC8 334 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 CDC23Q9UJX2 597 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 ADGRG4Q8IZF6 3080 aa14.18□□□□□ -0.14
PNKP-218ENST00000625299 A0A1W2PQJ5 194 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 ZNF487B1APH4 448 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 EPOP01588 193 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 SNRPB2P08579 225 aaKnown RBP14.17□□□□□ -0.14
PNKP-218ENST00000625299 TSFMP43897 325 aaKnown RBP14.17□□□□□ -0.14
PNKP-218ENST00000625299 PRLHRP49683 370 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 SOX8P57073 446 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 ZBED6P86452 979 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 TMPRSS15P98073 1019 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 WASHC5Q12768 1159 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 NR1I3Q14994 352 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 ZIC1Q15915 447 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 ZXDCQ2QGD7 858 aaPredicted RBP14.17□□□□□ -0.14
PNKP-218ENST00000625299 NKAIN1Q4KMZ8 207 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 AGAP7PQ5VUJ5 663 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 PRAMEF13Q5VWM6 474 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 MRPL14Q6P1L8 145 aaKnown RBP14.17□□□□□ -0.14
PNKP-218ENST00000625299 FAM180AQ6UWF9 173 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 PID1Q7Z2X4 250 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 ADGRF3Q8IZF5 1079 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 AGAP4Q96P64 663 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 FAM96AQ9H5X1 160 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 EPS8L2Q9H6S3 715 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 ITGB1BP2Q9UKP3 347 aa14.17□□□□□ -0.14
PNKP-218ENST00000625299 CELSR1Q9NYQ6 3014 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 A0A1B0GUH1 482 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 C2orf81A6NN90 581 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 CFAP99D6REC4 459 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 PECAM1P16284 738 aaPredicted RBP14.16□□□□□ -0.14
PNKP-218ENST00000625299 UGT2B7P16662 529 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 ALAS2P22557 587 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 PDHA2P29803 388 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 MPP3Q13368 585 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 KAZNQ674X7 775 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 MYO7BQ6PIF6 2116 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 PARP9Q8IXQ6 854 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 ZNF567Q8N184 647 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.16□□□□□ -0.14
PNKP-218ENST00000625299 MAGEB10Q96LZ2 347 aaPredicted RBP14.16□□□□□ -0.14
PNKP-218ENST00000625299 FCRL5Q96RD9 977 aa14.16□□□□□ -0.14
PNKP-218ENST00000625299 COPS8Q99627 209 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms