RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 CHPT1Q8WUD6 406 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 STON2Q8WXE9 905 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 TRIM62Q9BVG3 475 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 FCF1Q9Y324 198 aaKnown RBP20.02■□□□□ 0.8
SSBP3-216ENST00000610401 ZNF236Q9UL36 1845 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 GJB5O95377 273 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 S100BP04271 92 aaPredicted RBP20.02■□□□□ 0.8
SSBP3-216ENST00000610401 PGRP06401 933 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 AKT1P31749 480 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 DCTP40126 519 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 OXCT1P55809 520 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 NPTX1Q15818 432 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 SOWAHCQ53LP3 525 aaPredicted RBP20.02■□□□□ 0.8
SSBP3-216ENST00000610401 C6orf183Q5T699 404 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 SUSD1Q6UWL2 747 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 AHSA2Q719I0 299 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 EID3Q8N140 333 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 ARL10Q8N8L6 244 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 TRUB1Q8WWH5 349 aaKnown RBP20.02■□□□□ 0.8
SSBP3-216ENST00000610401 TPD52L3Q96J77 140 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 ALPK1Q96QP1 1244 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 UGT2B28Q9BY64 529 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 C6orf62Q9GZU0 229 aaPredicted RBP20.02■□□□□ 0.8
SSBP3-216ENST00000610401 AGO1Q9UL18 857 aaKnown RBP20.02■□□□□ 0.8
SSBP3-216ENST00000610401 ORC6Q9Y5N6 252 aa20.02■□□□□ 0.8
SSBP3-216ENST00000610401 LOC285556D6RIA3 1793 aa20.02■□□□□ 0.79
SSBP3-216ENST00000610401 LINC00854A0A1B0GVQ3 168 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 ZNF701M0R085 212 aaPredicted RBP20.01■□□□□ 0.79
SSBP3-216ENST00000610401 M0R129 80 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 FFAR2O15552 330 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 LCKP06239 509 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 LPOP22079 712 aaPredicted RBP20.01■□□□□ 0.79
SSBP3-216ENST00000610401 ZNF140P52738 457 aaPredicted RBP20.01■□□□□ 0.79
SSBP3-216ENST00000610401 GSTM4Q03013 218 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 FOXM1Q08050 763 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 PWP1Q13610 501 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 PDCD4Q53EL6 469 aaKnown RBP20.01■□□□□ 0.79
SSBP3-216ENST00000610401 LAIR1Q6GTX8 287 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 CEP68Q76N32 757 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 ZNF513Q8N8E2 541 aaPredicted RBP20.01■□□□□ 0.79
SSBP3-216ENST00000610401 BRINP2Q9C0B6 783 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 ROGDIQ9GZN7 287 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 PCDH10Q9P2E7 1040 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 ABCG2Q9UNQ0 655 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 PCDHB14Q9Y5E9 798 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 A6NL46 340 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 K7ERQ8 282 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 PRMT5O14744 637 aaPredicted RBP20.01■□□□□ 0.79
SSBP3-216ENST00000610401 PRLP01236 227 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 CDKN2CP42773 168 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 TPTEP56180 551 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 CYP27C1Q4G0S4 372 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 CATSPEREQ5SY80 951 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 NECAB2Q7Z6G3 386 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 GTF2H4Q92759 462 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 NLE1Q9NVX2 485 aaPredicted RBP20.01■□□□□ 0.79
SSBP3-216ENST00000610401 ELOVL2Q9NXB9 296 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 LOC730098B7Z3J9 87 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 H0YAE9 185 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 INSIG1O15503 277 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 PRR35P0CG20 571 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 TACR1P25103 407 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 MAGEA8P43361 318 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 MASP1P48740 699 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 SLC14A1Q13336 389 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 VARS2Q5ST30 1063 aaKnown RBP20.01■□□□□ 0.79
SSBP3-216ENST00000610401 SLC22A16Q86VW1 577 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 YIPF2Q9BWQ6 316 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 OSBPL10Q9BXB5 764 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 ZIM2Q9NZV7 527 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 DNAJB9Q9UBS3 223 aa20.01■□□□□ 0.79
SSBP3-216ENST00000610401 LOC100506127A0A0U1RQW1 187 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 FAM92AA1XBS5 289 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 PER2O15055 1255 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 LDLRAD1Q5T700 205 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 ANGPTL8Q6UXH0 198 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 RGL4Q8IZJ4 473 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 C1orf74Q96LT6 269 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 FAM193BQ96PV7 902 aaPredicted RBP20■□□□□ 0.79
SSBP3-216ENST00000610401 KATNAL1Q9BW62 490 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 GNPTGQ9UJJ9 305 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 CREG1O75629 220 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 NTRK1P04629 796 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 IGFBP5P24593 272 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 GSTM2P28161 218 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 CYP4Z1Q86W10 505 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 LRRC49Q8IUZ0 686 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 MSRB3Q8IXL7 192 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 ATG16L2Q8NAA4 619 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 FKBP10Q96AY3 582 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 SUSD3Q96L08 255 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 RNF167Q9H6Y7 350 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20■□□□□ 0.79
SSBP3-216ENST00000610401 POU2F3Q9UKI9 436 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 PRSS21Q9Y6M0 314 aa20■□□□□ 0.79
SSBP3-216ENST00000610401 TMEM221A6NGB7 291 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 ZNF99A8MXY4 864 aaPredicted RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 ULK1O75385 1050 aa19.99■□□□□ 0.79
SSBP3-216ENST00000610401 SLC25A14O95258 325 aaPredicted RBP19.99■□□□□ 0.79
SSBP3-216ENST00000610401 BMP4P12644 408 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms