RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 ADAMTS18Q8TE60 1221 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 CPLX3Q8WVH0 158 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 SYN2Q92777 582 aaPredicted RBP13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 FKBP10Q96AY3 582 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 TTC25Q96NG3 672 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 WDR54Q9H977 334 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 MRM3Q9HC36 420 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 SLC22A11Q9NSA0 550 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 SH3BGRL2Q9UJC5 107 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 ACSL5Q9ULC5 683 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 BZW2Q9Y6E2 419 aaKnown RBP13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 COLEC10Q9Y6Z7 277 aa13.36□□□□□ -0.27
CSNK1D-211ENST00000579316 KLHL33A6NCF5 533 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 BTN3A1O00481 513 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 ZSCAN9O15535 394 aaPredicted RBP13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 MFSD11O43934 449 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 SLC19A2O60779 497 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 KLHL18O94889 574 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 CRYABP02511 175 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 PIRTP0C851 137 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 PVRP15151 417 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 PRKCIP41743 596 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 CSNK1G2P78368 415 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 KLHL30Q0D2K2 578 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 SLC9A5Q14940 896 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 IFI16Q16666 785 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 LONRF1Q17RB8 773 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 TUBB8Q3ZCM7 444 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 IRF2BP2Q7Z5L9 587 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 GAS2L3Q86XJ1 694 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 DDHD1Q8NEL9 900 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 ACVR1CQ8NER5 493 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 SPDYE1Q8NFV5 336 aaPredicted RBP13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 GDAP1Q8TB36 358 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 NANOS1Q8WY41 292 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 ZNF653Q96CK0 615 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 THOC3Q96J01 351 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 FOXC2Q99958 501 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 NDC1Q9BTX1 674 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 GPR63Q9BZJ6 419 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 SRMSQ9H3Y6 488 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 PCDH18Q9HCL0 1135 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 TAS2R14Q9NYV8 317 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 DHCR7Q9UBM7 475 aaKnown RBP13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 CDC23Q9UJX2 597 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 AKAP6Q13023 2319 aa13.35□□□□□ -0.27
CSNK1D-211ENST00000579316 COL6A5A8TX70 2615 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 MGAT4DA6NG13 374 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 BTN3A3O00478 584 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 HCRTR1O43613 425 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 ONECUT2O95948 504 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 SLC4A1P02730 911 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 GYPCP04921 128 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 SLC35G4P0C7Q5 338 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 RARAP10276 462 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 TCF4P15884 667 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 SOX11P35716 441 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 ARG2P78540 354 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 C3AR1Q16581 482 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 LDLRAP1Q5SW96 308 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 TMEM220Q6QAJ8 160 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 MEX3BQ6ZN04 569 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 CHDHQ8NE62 594 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 LCN9Q8WX39 176 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 HSPH1Q92598 858 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 RMDN2Q96LZ7 410 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 SPSB2Q99619 263 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 SPRTNQ9H040 489 aaPredicted RBP13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 SLC26A1Q9H2B4 701 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 FAM60AQ9NP50 221 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 DLL4Q9NR61 685 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 ZNHIT6Q9NWK9 470 aaKnown RBP13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 TNFRSF10DQ9UBN6 386 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 HEBP2Q9Y5Z4 205 aa13.34□□□□□ -0.27
CSNK1D-211ENST00000579316 VPS13CQ709C8 3753 aa13.33□□□□□ -0.27
CSNK1D-211ENST00000579316 DYTNA2CJ06 578 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 OR2AG2A6NM03 316 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 ALBP02768 609 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 SERPING1P05155 500 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 PYGMP11217 842 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 ESRRAP11474 423 aaPredicted RBP13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 IGFBP2P18065 325 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 KLK2P20151 261 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 GCGRP47871 477 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 PAFAH1B3Q15102 231 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 FAAH2Q6GMR7 532 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 TLDC1Q6P9B6 456 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 CNGA4Q8IV77 575 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 C19orf47Q8N9M1 422 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 OR11G2Q8NGC1 345 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 OR2L2Q8NH16 312 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 FAM71BQ8TC56 605 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 HAS2Q92819 552 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 MRFAP1L1Q96HT8 127 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 VPS50Q96JG6 964 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 SRPK1Q96SB4 655 aaKnown RBP13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 SYT11Q9BT88 431 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 TMEM121Q9BTD3 319 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 KLHL25Q9H0H3 589 aa13.33□□□□□ -0.28
CSNK1D-211ENST00000579316 HAUS4Q9H6D7 363 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms