RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 BGNP21810 368 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 GRK2P25098 689 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 RPL10P27635 214 aaKnown RBP16.46■□□□□ 0.23
SNX1-203ENST00000558040 NAA20P61599 178 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 HNRNPKP61978 463 aaKnown RBP eCLIP16.46■□□□□ 0.237e-7■■■■□ 26.4
SNX1-203ENST00000558040 PHKG1Q16816 387 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 PFKFB4Q16877 469 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 UAP1L1Q3KQV9 507 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 ZNF542PQ5EBM4 170 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 SULT1C3Q6IMI6 304 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 CAPRIN2Q6IMN6 1127 aaKnown RBP16.46■□□□□ 0.23
SNX1-203ENST00000558040 PRR23BQ6ZRT6 265 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 RGS9BPQ6ZS82 235 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 TCAIMQ8N3R3 496 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 PTGR2Q8N8N7 351 aaPredicted RBP16.46■□□□□ 0.23
SNX1-203ENST00000558040 PIGKQ92643 395 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 PHF21BQ96EK2 531 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 RMDN2Q96LZ7 410 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 ZDHHC5Q9C0B5 715 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 ERVMER34-1Q9H9K5 563 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 ARL15Q9NXU5 204 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 NCKIPSDQ9NZQ3 722 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 HEBP2Q9Y5Z4 205 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 ZDBF2Q9HCK1 2354 aa16.46■□□□□ 0.23
SNX1-203ENST00000558040 NEMP2A6NFY4 417 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 ARHGEF33A8MVX0 844 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 KLF11O14901 512 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 C1orf105O95561 183 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 GUCA1CO95843 209 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 FGF3P11487 239 aaPredicted RBP16.45■□□□□ 0.22
SNX1-203ENST00000558040 SLC2A4P14672 509 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 AK4P27144 223 aaPredicted RBP16.45■□□□□ 0.22
SNX1-203ENST00000558040 HNMTP50135 292 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 HERVK_113P63132 956 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 STX3Q13277 289 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 SETDB1Q15047 1291 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 ELOCQ15369 112 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 CFAP157Q5JU67 520 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 PEAR1Q5VY43 1037 aaPredicted RBP16.45■□□□□ 0.22
SNX1-203ENST00000558040 ZC3H14Q6PJT7 736 aaKnown RBP16.45■□□□□ 0.22
SNX1-203ENST00000558040 SLC30A9Q6PML9 568 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 ABRAXAS1Q6UWZ7 409 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 TAF8Q7Z7C8 310 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 DCUN1D3Q8IWE4 304 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 SPDYE1Q8NFV5 336 aaPredicted RBP16.45■□□□□ 0.22
SNX1-203ENST00000558040 CEP76Q8TAP6 659 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 ATL1Q8WXF7 558 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 ZNF75CPQ92670 426 aaPredicted RBP16.45■□□□□ 0.22
SNX1-203ENST00000558040 DLG3Q92796 817 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 CCDC138Q96M89 665 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 C12orf66Q96MD2 445 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 ERVK-6Q9BXR3 956 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 COL25A1Q9BXS0 654 aaPredicted RBP16.45■□□□□ 0.22
SNX1-203ENST00000558040 TRIT1Q9H3H1 467 aaKnown RBP16.45■□□□□ 0.22
SNX1-203ENST00000558040 TCEAL2Q9H3H9 227 aaPredicted RBP16.45■□□□□ 0.22
SNX1-203ENST00000558040 PRDM8Q9NQV8 689 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 SPASTQ9UBP0 616 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 KLF15Q9UIH9 416 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 PCOLCE2Q9UKZ9 415 aa16.45■□□□□ 0.22
SNX1-203ENST00000558040 TNPO3Q9Y5L0 923 aaKnown RBP16.45■□□□□ 0.22
SNX1-203ENST00000558040 A0A1B0GVT2 93 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 TMEM114B3SHH9 223 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 IMPDH1P20839 514 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 LSP1P33241 339 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 SERPINB5P36952 375 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 BDKRB1P46663 353 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 KRT33BQ14525 404 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 PRRT3Q5FWE3 981 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 GKN2Q86XP6 184 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 NRROSQ86YC3 692 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 TBC1D21Q8IYX1 336 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 SDR16C5Q8N3Y7 309 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 OR5K2Q8NHB8 316 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 CCL4L1Q8NHW4 92 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 RAD51AP1Q96B01 352 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 L3HYPDHQ96EM0 354 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 LRRC61Q9BV99 259 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 MVB12BQ9H7P6 319 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 IMP3Q9NV31 184 aaKnown RBP16.44■□□□□ 0.22
SNX1-203ENST00000558040 WWOXQ9NZC7 414 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 TBC1D29Q9UFV1 150 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 WDR37Q9Y2I8 494 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 ST14Q9Y5Y6 855 aa16.44■□□□□ 0.22
SNX1-203ENST00000558040 TNRC6BQ9UPQ9 1833 aaKnown RBP16.44■□□□□ 0.22
SNX1-203ENST00000558040 TCP11X1B4DZS4 312 aa16.43■□□□□ 0.22
SNX1-203ENST00000558040 MYO1CO00159 1063 aa16.43■□□□□ 0.22
SNX1-203ENST00000558040 KDM1AO60341 852 aa16.43■□□□□ 0.22
SNX1-203ENST00000558040 MTHFD1P11586 935 aaKnown RBP16.43■□□□□ 0.22
SNX1-203ENST00000558040 F3P13726 295 aa16.43■□□□□ 0.22
SNX1-203ENST00000558040 NDUFS1P28331 727 aa16.43■□□□□ 0.22
SNX1-203ENST00000558040 CTSKP43235 329 aa16.43■□□□□ 0.22
SNX1-203ENST00000558040 NAGLUP54802 743 aa16.43■□□□□ 0.22
SNX1-203ENST00000558040 TCEA2Q15560 299 aa16.43■□□□□ 0.22
SNX1-203ENST00000558040 DUOXA1Q1HG43 343 aa16.43■□□□□ 0.22
SNX1-203ENST00000558040 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.43■□□□□ 0.22
SNX1-203ENST00000558040 METTL2BQ6P1Q9 378 aaKnown RBP16.43■□□□□ 0.22
SNX1-203ENST00000558040 ZCCHC23Q6ZST2 131 aa16.43■□□□□ 0.22
SNX1-203ENST00000558040 RAB42Q8N4Z0 105 aa16.43■□□□□ 0.22
SNX1-203ENST00000558040 CCNYL1Q8N7R7 359 aa16.43■□□□□ 0.22
SNX1-203ENST00000558040 PPP4R1Q8TF05 950 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms