RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 EXTL1Q92935 676 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 PMEPA1Q969W9 287 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 FERD3LQ96RJ6 166 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 INSM2Q96T92 566 aaPredicted RBP7.15□□□□□ -1.27
SCFD1-222ENST00000556768 SRMSQ9H3Y6 488 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 KIR3DX1Q9H7L2 352 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 FANCEQ9HB96 536 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 LNPEPQ9UIQ6 1025 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 KCND3Q9UK17 655 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 RARRES3Q9UL19 164 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 PADI1Q9ULC6 663 aa7.15□□□□□ -1.27
SCFD1-222ENST00000556768 R3HDM2Q9Y2K5 976 aaKnown RBP7.15□□□□□ -1.27
SCFD1-222ENST00000556768 HEMK1Q9Y5R4 338 aaPredicted RBP7.15□□□□□ -1.27
SCFD1-222ENST00000556768 SPTA1P02549 2419 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 A0A0U1RQJ8 604 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 TCRBV7S2A1N4TA0A589 114 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 CCDC78A2IDD5 438 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 OR6C74A6NCV1 312 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 OR5K3A6NET4 321 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 TLCD2A6NGC4 264 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 MROH6A6NGR9 719 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 LIN7AO14910 233 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-222ENST00000556768 PFDN6O15212 129 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 ZBTB11O95625 1053 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-222ENST00000556768 FGGP02679 453 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 ADRA1DP25100 572 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 LEPRP48357 1165 aaKnown RBP7.14□□□□□ -1.27
SCFD1-222ENST00000556768 MSLNQ13421 630 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-222ENST00000556768 MAP7Q14244 749 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 OASLQ15646 514 aaKnown RBP7.14□□□□□ -1.27
SCFD1-222ENST00000556768 SYTL3Q4VX76 610 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 FASTKD1Q53R41 847 aaKnown RBP7.14□□□□□ -1.27
SCFD1-222ENST00000556768 KLHDC8BQ8IXV7 354 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 ZNF843Q8N446 348 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 CLDN19Q8N6F1 224 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 PPHLN1Q8NEY8 458 aaKnown RBP7.14□□□□□ -1.27
SCFD1-222ENST00000556768 OR4E2Q8NGC2 313 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 OR52K1Q8NGK4 314 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 KLHL6Q8WZ60 621 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 TTC9Q92623 222 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 ANP32BQ92688 251 aaKnown RBP7.14□□□□□ -1.27
SCFD1-222ENST00000556768 TFGQ92734 400 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-222ENST00000556768 ELMO2Q96JJ3 720 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 SLC45A3Q96JT2 553 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 FCRL4Q96PJ5 515 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 NAP1L3Q99457 506 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-222ENST00000556768 MVB12BQ9H7P6 319 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 APMAPQ9HDC9 416 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 PIH1D1Q9NWS0 290 aaKnown RBP7.14□□□□□ -1.27
SCFD1-222ENST00000556768 SOHLH2Q9NX45 425 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 OGFRQ9NZT2 677 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 SLC24A2Q9UI40 661 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 DRG1Q9Y295 367 aaKnown RBP7.14□□□□□ -1.27
SCFD1-222ENST00000556768 TMEM184BQ9Y519 407 aaPredicted RBP7.14□□□□□ -1.27
SCFD1-222ENST00000556768 RPS6KL1Q9Y6S9 549 aa7.14□□□□□ -1.27
SCFD1-222ENST00000556768 GCN1Q92616 2671 aaKnown RBP7.14□□□□□ -1.27
SCFD1-222ENST00000556768 ZNF462Q96JM2 2506 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 IGLV3-16A0A075B6K0 115 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 GSAPA4D1B5 854 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 B8ZZF3 427 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 CCL22O00626 93 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 KIF1CO43896 1103 aaKnown RBP7.13□□□□□ -1.27
SCFD1-222ENST00000556768 CEP104O60308 925 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 SUN1O94901 812 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 LIFP15018 202 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 TCN2P20062 427 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 CDH3P22223 829 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 CCR10P46092 362 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 BASP1P80723 227 aaKnown RBP7.13□□□□□ -1.27
SCFD1-222ENST00000556768 TUBB3Q13509 450 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 ITIH4Q14624 930 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 CCDC38Q502W7 563 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 CAPRIN2Q6IMN6 1127 aaKnown RBP7.13□□□□□ -1.27
SCFD1-222ENST00000556768 DRICH1Q6PGQ1 229 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-222ENST00000556768 AFTPHQ6ULP2 937 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 OR4L1Q8NH43 312 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 OR8K5Q8NH50 307 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 SEC14L1Q92503 715 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 ELMO1Q92556 727 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 N4BP2L2Q92802 583 aaPredicted RBP7.13□□□□□ -1.27
SCFD1-222ENST00000556768 PEX13Q92968 403 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 HDAC10Q969S8 669 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 RHOVQ96L33 236 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 TRIM55Q9BYV6 548 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 SLC7A5P2Q9GIP4 190 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 COG4Q9H9E3 785 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 SYTL2Q9HCH5 934 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 FGF21Q9NSA1 209 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 BFARQ9NZS9 450 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 POLG2Q9UHN1 485 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 RIMKLBQ9ULI2 386 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 ANKRD36A6QL64 1941 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 MYLKQ15746 1914 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 LRRK1Q38SD2 2015 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 HELZ2Q9BYK8 2649 aaKnown RBP7.13□□□□□ -1.27
SCFD1-222ENST00000556768 IGHV5-51A0A0C4DH38 117 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 TRBV5-4A0A0C4DH59 114 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 KATNA1O75449 491 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 SPAG6O75602 509 aa7.13□□□□□ -1.27
SCFD1-222ENST00000556768 KIAA0754O94854 1291 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms