RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 MFSD6LQ8IWD5 586 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 NELL1Q92832 810 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 GLMNQ92990 594 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 ZFRQ96KR1 1074 aaKnown RBP12.97□□□□□ -0.33
HMGN1-216ENST00000486741 SMAD5Q99717 465 aaKnown RBP12.97□□□□□ -0.33
HMGN1-216ENST00000486741 ADPRHL2Q9NX46 363 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 MAGEL2Q9UJ55 1249 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 LOC285095A0A1B0GVY8 99 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 MMP20O60882 483 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 STATHP02808 62 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 BPIP17213 487 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 BDKRB1P46663 353 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 NAA20P61599 178 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 ARF5P84085 180 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 RAB33AQ14088 237 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 GPR107Q5VW38 600 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 WBP2Q969T9 261 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 NUMBLQ9Y6R0 609 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 FAM234BA2RU67 622 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 hCG_2039718K7EN88 272 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 FPGTO14772 594 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 TRIM24O15164 1050 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 EIF2S1P05198 315 aaKnown RBP12.97□□□□□ -0.33
HMGN1-216ENST00000486741 SLC35G4P0C7Q5 338 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 RPL10P27635 214 aaKnown RBP12.97□□□□□ -0.33
HMGN1-216ENST00000486741 VIPR2P41587 438 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 C8orf59Q8N0T1 100 aaPredicted RBP12.97□□□□□ -0.33
HMGN1-216ENST00000486741 FERD3LQ96RJ6 166 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 BBS4Q96RK4 519 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 IL26Q9NPH9 171 aa12.97□□□□□ -0.33
HMGN1-216ENST00000486741 PRORSD1PA6NEY8 169 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 WASH4PA8MWX3 477 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 TTC34A8MYJ7 566 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 BCAS2O75934 225 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-216ENST00000486741 PRNPP04156 253 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 ATP1B2P14415 290 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-216ENST00000486741 ARRB2P32121 409 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 FPGSQ05932 587 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 LAPTM5Q13571 262 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 ADRM1Q16186 407 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 ANKRD26P1Q6NSI1 321 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 SH2D5Q6ZV89 423 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 SCML4Q8N228 414 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 TIFAQ96CG3 184 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 REPS1Q96D71 796 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 TCEAL4Q96EI5 215 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 REXO5Q96IC2 774 aaKnown RBP12.96□□□□□ -0.33
HMGN1-216ENST00000486741 PRICKLE1Q96MT3 831 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-216ENST00000486741 ARNT2Q9HBZ2 717 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 MAGEE1Q9HCI5 957 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 GIMAP4Q9NUV9 329 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 INTS7Q9NVH2 962 aaKnown RBP12.96□□□□□ -0.33
HMGN1-216ENST00000486741 A0A1W2PP18 115 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 CARNS1A5YM72 827 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 G3V2T6 193 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 SLC22A2O15244 555 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 TGFB1P01137 390 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 MCCD1P59942 119 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-216ENST00000486741 HPCAP84074 193 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 CES4AQ5XG92 561 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 OR4F3Q6IEY1 312 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 CES5AQ6NT32 575 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 OR52J3Q8NH60 311 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 OR14C36Q8NHC7 312 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 BCL7CQ8WUZ0 217 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-216ENST00000486741 OVCA2Q8WZ82 227 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 FAM192AQ9GZU8 254 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 PNPLA3Q9NST1 481 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 RAB23Q9ULC3 237 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 TMCC3Q9ULS5 477 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 SH3GLB1Q9Y371 365 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 PLK4O00444 970 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 GNAZP19086 355 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 SLC7A1P30825 629 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 NR1H2P55055 460 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 RHDQ02161 417 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 SUSD1Q6UWL2 747 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 ABRAXAS1Q6UWZ7 409 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 LSMEM2Q8N112 164 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 SLC39A11Q8N1S5 342 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 KRTCAP2Q8N6L1 136 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 BADQ92934 168 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 CENPNQ96H22 339 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-216ENST00000486741 CGREF1Q99674 301 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 HTATIP2Q9BUP3 242 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 SOX17Q9H6I2 414 aaPredicted RBP12.96□□□□□ -0.33
HMGN1-216ENST00000486741 SLC28A3Q9HAS3 691 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 RASSF1Q9NS23 344 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 IL17CQ9P0M4 197 aa12.96□□□□□ -0.33
HMGN1-216ENST00000486741 WNT9AO14904 365 aa12.96□□□□□ -0.34
HMGN1-216ENST00000486741 FAM20BO75063 409 aa12.96□□□□□ -0.34
HMGN1-216ENST00000486741 NFATC1O95644 943 aa12.96□□□□□ -0.34
HMGN1-216ENST00000486741 XIAPP98170 497 aa12.96□□□□□ -0.34
HMGN1-216ENST00000486741 C2orf80Q0P641 193 aa12.96□□□□□ -0.34
HMGN1-216ENST00000486741 ABRAXAS2Q15018 415 aa12.96□□□□□ -0.34
HMGN1-216ENST00000486741 PHKG1Q16816 387 aa12.96□□□□□ -0.34
HMGN1-216ENST00000486741 CSGALNACT1Q8TDX6 532 aa12.96□□□□□ -0.34
HMGN1-216ENST00000486741 MAP4K5Q9Y4K4 846 aa12.96□□□□□ -0.34
HMGN1-216ENST00000486741 DYTNA2CJ06 578 aa12.95□□□□□ -0.34
HMGN1-216ENST00000486741 NPIPB15A6NHN6 443 aaPredicted RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms