RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 DNASE1P24855 282 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 SOX11P35716 441 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 ZNF165P49910 485 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 CTSCP53634 463 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 TMPRSS15P98073 1019 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 CACNG1Q06432 222 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 SYCP1Q15431 976 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 ATP13A5Q4VNC0 1218 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 C3P1Q6ZMU1 363 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 KBTBD2Q8IY47 623 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 TAB3Q8N5C8 712 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-203ENST00000467533 ACVR1CQ8NER5 493 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 SPDYE1Q8NFV5 336 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-203ENST00000467533 BRSK1Q8TDC3 778 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 BRIX1Q8TDN6 353 aaKnown RBP9.85□□□□□ -0.83
HDAC3-203ENST00000467533 AGAP11Q8TF27 550 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 HAS2Q92819 552 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 C18orf12Q96KH6 178 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 TIGD1Q96MW7 591 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 GPR137Q96N19 417 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 ALPK1Q96QP1 1244 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 SPSB2Q99619 263 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 ADGRE3Q9BY15 652 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 GPR63Q9BZJ6 419 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 TSPAN10Q9H1Z9 355 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-203ENST00000467533 WDR54Q9H977 334 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 FAM60AQ9NP50 221 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 NPDC1Q9NQX5 325 aaPredicted RBP9.85□□□□□ -0.83
HDAC3-203ENST00000467533 SLC22A11Q9NSA0 550 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 RWDD2AQ9UIY3 292 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 TMPRSS11EQ9UL52 423 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 PPT2Q9UMR5 302 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 PLEKHA6Q9Y2H5 1048 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 ZNF711Q9Y462 761 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 CSPG4Q6UVK1 2322 aa9.85□□□□□ -0.83
HDAC3-203ENST00000467533 NKX2-6A6NCS4 301 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 FAM90A27PA6NNH2 459 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 C2orf74A8MZ97 194 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 BTN3A3O00478 584 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 HCRTR1O43613 425 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 WISP2O76076 250 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 PRAMEF1O95521 474 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 HLA-DQB2P05538 268 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 HEXAP06865 529 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 CTSBP07858 339 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 INHBBP09529 407 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 MYBL2P10244 700 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 PIM1P11309 404 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-203ENST00000467533 ACPPP15309 386 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 MIPP30301 263 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 CD86P42081 329 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 DGKQP52824 942 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 NIPAL4Q0D2K0 466 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 NKG7Q16617 165 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 TPD52L1Q16890 204 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-203ENST00000467533 METRNLQ641Q3 311 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 HIBCHQ6NVY1 386 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-203ENST00000467533 TLDC1Q6P9B6 456 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 TMEM220Q6QAJ8 160 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 CYP4V2Q6ZWL3 525 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-203ENST00000467533 OVCH1Q7RTY7 1134 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 TRIM73Q86UV7 250 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 PSTKQ8IV42 348 aaKnown RBP9.84□□□□□ -0.83
HDAC3-203ENST00000467533 HSCBQ8IWL3 235 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 DMRTC2Q8IXT2 367 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-203ENST00000467533 EID3Q8N140 333 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 BEND7Q8N7W2 519 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-203ENST00000467533 RASGEF1AQ8N9B8 481 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 ARRDC2Q8TBH0 407 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 THAP3Q8WTV1 239 aaPredicted RBP9.84□□□□□ -0.83
HDAC3-203ENST00000467533 DLG3Q92796 817 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 ARSGQ96EG1 525 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 RMDN2Q96LZ7 410 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 LIME1Q9H400 295 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 RBM22Q9NW64 420 aaKnown RBP eCLIP9.84□□□□□ -0.831e-7■■■■■ 41.1
HDAC3-203ENST00000467533 ACTR10Q9NZ32 417 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 NXT1Q9UKK6 140 aaKnown RBP9.84□□□□□ -0.83
HDAC3-203ENST00000467533 LUC7L2Q9Y383 392 aaKnown RBP9.84□□□□□ -0.83
HDAC3-203ENST00000467533 ATP6V1DQ9Y5K8 247 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 HEBP2Q9Y5Z4 205 aa9.84□□□□□ -0.83
HDAC3-203ENST00000467533 COL6A5A8TX70 2615 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 E9PLN8 166 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 TSPAN12O95859 305 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 WDPCPO95876 746 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 ALBP02768 609 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 PRR35P0CG20 571 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 ITGAXP20702 1163 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 FDXRP22570 491 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 PCSK6P29122 969 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 SOX5P35711 763 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 FNBP1LQ5T0N5 605 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 ERICH6BQ5W0A0 696 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 TIGD7Q6NT04 549 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-203ENST00000467533 TTLL10Q6ZVT0 673 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 TMC3Q7Z5M5 1100 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 MAML1Q92585 1016 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 HSPH1Q92598 858 aa9.83□□□□□ -0.84
HDAC3-203ENST00000467533 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.83□□□□□ -0.84
HDAC3-203ENST00000467533 RMND5BQ96G75 393 aaPredicted RBP9.83□□□□□ -0.84
HDAC3-203ENST00000467533 CSPG4P5Q96PW8 444 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms