RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 ABCG2Q9UNQ0 655 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 CXCR6O00574 342 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 SERPINF2P08697 491 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 RSPO2Q6UXX9 243 aaPredicted RBP13.66□□□□□ -0.22
NUP98-204ENST00000397004 LGI2Q8N0V4 545 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 DYNC2LI1Q8TCX1 351 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 RMDN1Q96DB5 314 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 VMP1Q96GC9 406 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 CCDC90BQ9GZT6 254 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 P2RY12Q9H244 342 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 SCHIP1Q9P0W5 487 aaPredicted RBP13.66□□□□□ -0.22
NUP98-204ENST00000397004 RIMKLBQ9ULI2 386 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 FAM32AQ9Y421 112 aaKnown RBP13.66□□□□□ -0.22
NUP98-204ENST00000397004 A0A0U1RQF3 1178 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 MOXD2PA6NHM9 499 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 ZNF623O75123 536 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 DIRAS1O95057 198 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 IGHA2P01877 340 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 HOXB8P17481 243 aaPredicted RBP13.66□□□□□ -0.22
NUP98-204ENST00000397004 HOXA9P31269 272 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 HSPA7P48741 367 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 CPT1AP50416 773 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 GABARAPL2P60520 117 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 RPS24P62847 133 aaKnown RBP13.66□□□□□ -0.22
NUP98-204ENST00000397004 PHKG1Q16816 387 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 RUNDC3AQ59EK9 446 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 TTC23Q5W5X9 447 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 EPS8L2Q9H6S3 715 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 IL37Q9NZH6 218 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 MARCH2Q9P0N8 246 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 PKP3Q9Y446 797 aa13.66□□□□□ -0.22
NUP98-204ENST00000397004 SLC12A8A0AV02 714 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 TTC34A8MYJ7 566 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 NOL3O60936 208 aaKnown RBP13.65□□□□□ -0.22
NUP98-204ENST00000397004 PARNO95453 639 aaKnown RBP13.65□□□□□ -0.22
NUP98-204ENST00000397004 GUCA1CO95843 209 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 CHEK2O96017 543 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 GSNP06396 782 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 DAPP51397 102 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 IL2P60568 153 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 SIM2Q14190 667 aaPredicted RBP13.65□□□□□ -0.22
NUP98-204ENST00000397004 FAM110CQ1W6H9 321 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 AFTPHQ6ULP2 937 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 MBOAT1Q6ZNC8 495 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 GCNT7Q6ZNI0 430 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 CALHM3Q86XJ0 350 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 NKAPQ8N5F7 415 aaKnown RBP13.65□□□□□ -0.22
NUP98-204ENST00000397004 SLIRPQ9GZT3 109 aaKnown RBP13.65□□□□□ -0.22
NUP98-204ENST00000397004 IPPKQ9H8X2 491 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 WDR37Q9Y2I8 494 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 GRXCR2A6NFK2 248 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 ZNF99A8MXY4 864 aaPredicted RBP13.65□□□□□ -0.22
NUP98-204ENST00000397004 SLC16A6O15403 523 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 SERPINA1P01009 418 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 GSTT2P0CG29 244 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 GSTT2BP0CG30 244 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 MYCLP1P12525 358 aaPredicted RBP13.65□□□□□ -0.22
NUP98-204ENST00000397004 SLC2A4P14672 509 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 NRIP1P48552 1158 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 SLC35A2P78381 396 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 TAF10Q12962 218 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 GTF2H2Q13888 395 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 TAF1AQ15573 450 aaPredicted RBP13.65□□□□□ -0.22
NUP98-204ENST00000397004 TRIP4Q15650 581 aaPredicted RBP13.65□□□□□ -0.22
NUP98-204ENST00000397004 PAGE2BQ5JRK9 111 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 GTF2H2CQ6P1K8 395 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 GPR149Q86SP6 731 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 RNF168Q8IYW5 571 aaPredicted RBP13.65□□□□□ -0.22
NUP98-204ENST00000397004 ADAM2Q99965 735 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 VPS51Q9UID3 782 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 PCDHGB1Q9Y5G3 927 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 CREG1O75629 220 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 ARL1P40616 181 aaPredicted RBP13.65□□□□□ -0.22
NUP98-204ENST00000397004 MVKQ03426 396 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 PCBP2Q15366 365 aaKnown RBP eCLIP13.65□□□□□ -0.22
NUP98-204ENST00000397004 CST9Q5W186 159 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 CPZQ66K79 652 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 MILR1Q7Z6M3 343 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 RTN4RL1Q86UN2 441 aaPredicted RBP13.65□□□□□ -0.22
NUP98-204ENST00000397004 ANKRD46Q86W74 232 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 LPCAT1Q8NF37 534 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 MCOLN3Q8TDD5 553 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 PSKH2Q96QS6 385 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 RRAGCQ9HB90 399 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 SIRT5Q9NXA8 310 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 RBMX2Q9Y388 322 aaKnown RBP13.65□□□□□ -0.22
NUP98-204ENST00000397004 PRSS21Q9Y6M0 314 aa13.65□□□□□ -0.22
NUP98-204ENST00000397004 PGRP06401 933 aa13.64□□□□□ -0.23
NUP98-204ENST00000397004 RCVRNP35243 200 aa13.64□□□□□ -0.23
NUP98-204ENST00000397004 SELENBP1Q13228 472 aa13.64□□□□□ -0.23
NUP98-204ENST00000397004 MAPRE1Q15691 268 aaKnown RBP13.64□□□□□ -0.23
NUP98-204ENST00000397004 CES5AQ6NT32 575 aa13.64□□□□□ -0.23
NUP98-204ENST00000397004 TMEM53Q6P2H8 277 aa13.64□□□□□ -0.23
NUP98-204ENST00000397004 TTC30BQ8N4P2 665 aa13.64□□□□□ -0.23
NUP98-204ENST00000397004 RBM4BQ9BQ04 359 aaKnown RBP13.64□□□□□ -0.23
NUP98-204ENST00000397004 PSD2Q9BQI7 771 aa13.64□□□□□ -0.23
NUP98-204ENST00000397004 RBM4Q9BWF3 364 aaKnown RBP13.64□□□□□ -0.23
NUP98-204ENST00000397004 DUSP21Q9H596 190 aa13.64□□□□□ -0.23
NUP98-204ENST00000397004 TRMT6Q9UJA5 497 aaKnown RBP13.64□□□□□ -0.23
NUP98-204ENST00000397004 DLGAP4Q9Y2H0 992 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms