RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 NFE2L1Q14494 772 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 TMEM259Q4ZIN3 620 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 TMEM31Q5JXX7 168 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 CDKL4Q5MAI5 379 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 SCIMPQ6UWF3 145 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 RINLQ6ZS11 566 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 Q6ZS52 159 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 USP30Q70CQ3 517 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 EFL1Q7Z2Z2 1120 aaKnown RBP8.44□□□□□ -1.06
TDP1-203ENST00000393454 LRRTM4Q86VH4 590 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 AMZ2Q86W34 360 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 MYLK4Q86YV6 388 aaPredicted RBP8.44□□□□□ -1.06
TDP1-203ENST00000393454 ZNF547Q8IVP9 402 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 C10orf67Q8IYJ2 551 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 DEFB123Q8N688 67 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 POU5F2Q8N7G0 328 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 OR4F6Q8NGB9 312 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 METTL6Q8TCB7 284 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 HM13Q8TCT9 377 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 UBTD2Q8WUN7 234 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 SLC7A6OSQ96CW6 309 aaPredicted RBP8.44□□□□□ -1.06
TDP1-203ENST00000393454 MAELQ96JY0 434 aaKnown RBP8.44□□□□□ -1.06
TDP1-203ENST00000393454 GUCD1Q96NT3 240 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 TEX101Q9BY14 249 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 ATG10Q9H0Y0 220 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 LRMDAQ9H2I8 198 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 LNPEPQ9UIQ6 1025 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 ZNF225Q9UK10 706 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 STK38LQ9Y2H1 464 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 ZFC3H1O60293 1989 aaKnown RBP8.44□□□□□ -1.06
TDP1-203ENST00000393454 PRUNE2Q8WUY3 3088 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 LOC100653049A0A140TA62 436 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 C17orf113A0A1B0GUU1 675 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 MGAT4DA6NG13 374 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 ARHGEF33A8MVX0 844 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 GYG2O15488 501 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 PSIP1O75475 530 aaKnown RBP8.44□□□□□ -1.06
TDP1-203ENST00000393454 KRT34O76011 436 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 WDR47O94967 919 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 CAPN1P07384 714 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 EZRP15311 586 aaKnown RBP8.44□□□□□ -1.06
TDP1-203ENST00000393454 NQO1P15559 274 aaKnown RBP8.44□□□□□ -1.06
TDP1-203ENST00000393454 GABRG2P18507 467 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 AOC1P19801 751 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 HMOX2P30519 316 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 MAPK9P45984 424 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 PIK3CGP48736 1102 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 HNMTP50135 292 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 TPMTP51580 245 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 INHBCP55103 352 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 ERVPABLB-1P60509 514 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 PPP2CBP62714 309 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 PPP2CAP67775 309 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 KLF10Q13118 480 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 MAP7D1Q3KQU3 841 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 LETMD1Q6P1Q0 360 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 ASRGL1Q7L266 308 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 OR2L2Q8NH16 312 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 STON2Q8WXE9 905 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 FAM131CQ96AQ9 280 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 PYCR2Q96C36 320 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 TUBGCP3Q96CW5 907 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 CMTM5Q96DZ9 223 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 C3orf30Q96M34 536 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 NUSAP1Q9BXS6 441 aaKnown RBP8.44□□□□□ -1.06
TDP1-203ENST00000393454 BTBD1Q9H0C5 482 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 SLC32A1Q9H598 525 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 AKTIPQ9H8T0 292 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 LMAN1LQ9HAT1 526 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 POLMQ9NP87 494 aaPredicted RBP8.44□□□□□ -1.06
TDP1-203ENST00000393454 PFDN4Q9NQP4 134 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 KLC4Q9NSK0 619 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 GULP1Q9UBP9 304 aa8.44□□□□□ -1.06
TDP1-203ENST00000393454 PCYT1BQ9Y5K3 369 aaPredicted RBP8.44□□□□□ -1.06
TDP1-203ENST00000393454 LRRC72A6NJI9 287 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 CACNB4O00305 520 aaPredicted RBP8.43□□□□□ -1.06
TDP1-203ENST00000393454 CHUKO15111 745 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 MYCLP1P12525 358 aaPredicted RBP8.43□□□□□ -1.06
TDP1-203ENST00000393454 HGFP14210 728 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 ITPKAP23677 461 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 ACSL1P33121 698 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 IGFALSP35858 605 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 TRIM23P36406 574 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 PLOD1Q02809 727 aaPredicted RBP8.43□□□□□ -1.06
TDP1-203ENST00000393454 UBXN2BQ14CS0 331 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 NAA25Q14CX7 972 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 PTCHD3Q3KNS1 767 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.43□□□□□ -1.06
TDP1-203ENST00000393454 TCHHL1Q5QJ38 904 aaPredicted RBP8.43□□□□□ -1.06
TDP1-203ENST00000393454 METTL2BQ6P1Q9 378 aaKnown RBP8.43□□□□□ -1.06
TDP1-203ENST00000393454 NEK5Q6P3R8 708 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 IL27RAQ6UWB1 636 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 FAM83HQ6ZRV2 1179 aaPredicted RBP8.43□□□□□ -1.06
TDP1-203ENST00000393454 LRRC70Q7Z2Q7 622 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 LONP2Q86WA8 852 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 FBXL8Q96CD0 374 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 MED8Q96G25 268 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 LINC00615Q96LM1 132 aaPredicted RBP8.43□□□□□ -1.06
TDP1-203ENST00000393454 CCDC138Q96M89 665 aa8.43□□□□□ -1.06
TDP1-203ENST00000393454 RAB3IPQ96QF0 476 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms