RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 UAP1L1Q3KQV9 507 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 WASH2PQ6VEQ5 465 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 MBOAT1Q6ZNC8 495 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 OR5AR1Q8NGP9 310 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 RHEBL1Q8TAI7 183 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 PATE1Q8WXA2 126 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 TFGQ92734 400 aaPredicted RBP18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 C12orf66Q96MD2 445 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 NRTNQ99748 197 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 WASH6PQ9NQA3 447 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 UTP6Q9NYH9 597 aaKnown RBP18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 ZNF624Q9P2J8 865 aaPredicted RBP18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 SPASTQ9UBP0 616 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 PCOLCE2Q9UKZ9 415 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 RAB23Q9ULC3 237 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 PCDHGA5Q9Y5G8 931 aa18.54■□□□□ 0.56
CHMP4A-201ENST00000347519 CACNA1HO95180 2353 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 A0A1B0GTQ1 180 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 TM9SF1O15321 606 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 YY2O15391 372 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 AQP9O43315 295 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 C1orf105O95561 183 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 C8GP07360 202 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 RBP1P09455 135 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 CHN1P15882 459 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 CCDC153Q494R4 210 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 PLA2G2CQ5R387 149 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 LAIR1Q6GTX8 287 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 KANSL1Q7Z3B3 1105 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 GPSM1Q86YR5 675 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 SLC25A45Q8N413 288 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 STAG3L4Q8TBR4 150 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 MECRQ9BV79 373 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 SLC12A9Q9BXP2 914 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 RNF112Q9ULX5 631 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 OARD1Q9Y530 152 aa18.53■□□□□ 0.56
CHMP4A-201ENST00000347519 DNAH14Q0VDD8 3507 aa18.52■□□□□ 0.56
CHMP4A-201ENST00000347519 SLC16A5O15375 505 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 DLX3O60479 287 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 GIMD1P0DJR0 217 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 TPBGLP0DKB5 382 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 KPNA2P52292 529 aaKnown RBP18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 GYS2P54840 703 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 GRB7Q14451 532 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 PCLAFQ15004 111 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 ELOCQ15369 112 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 C18orf21Q32NC0 220 aaPredicted RBP18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 UNC5DQ6UXZ4 953 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 RABEPKQ7Z6M1 372 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 ADAMTSL2Q86TH1 951 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 CCDC63Q8NA47 563 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 FAM46DQ8NEK8 389 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 PARVBQ9HBI1 364 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 IMP3Q9NV31 184 aaKnown RBP18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 NKIRAS1Q9NYS0 192 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 ASF1AQ9Y294 204 aa18.52■□□□□ 0.55
CHMP4A-201ENST00000347519 GPR179Q6PRD1 2367 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 LAMA1P25391 3075 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 WDR91A4D1P6 747 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 NCF1BA6NI72 391 aaPredicted RBP18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 NCF1CA8MVU1 366 aaPredicted RBP18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 SUPT3HB4E1H0 165 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 IFRD1O00458 451 aaPredicted RBP18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 ARHGAP33O14559 1287 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 SUPT3HO75486 399 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 MTHFD1P11586 935 aaKnown RBP18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 F3P13726 295 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 NCF1P14598 390 aaPredicted RBP18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 EPHA8P29322 1005 aaPredicted RBP18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 ALDH3A1P30838 453 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 SLC19A1P41440 591 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 SERPINB4P48594 390 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 PRKG2Q13237 762 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 SP140Q13342 867 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 TGFBIQ15582 683 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 ZXDCQ2QGD7 858 aaPredicted RBP18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 DEFB133Q30KQ1 61 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 FBXO48Q5FWF7 155 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 IYDQ6PHW0 289 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 ZYG11AQ6WRX3 759 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 GATAD2AQ86YP4 633 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 NAGSQ8N159 534 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 LMNTD1Q8N9Z9 388 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 ATOH1Q92858 354 aaPredicted RBP18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 MOCOSQ96EN8 888 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 FOPNLQ96NB1 174 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 FERD3LQ96RJ6 166 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 PAIP2Q9BPZ3 127 aaKnown RBP18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 GAREM1Q9H706 876 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 ACSS2Q9NR19 701 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 COPG2Q9UBF2 871 aa18.51■□□□□ 0.55
CHMP4A-201ENST00000347519 MYO15AQ9UKN7 3530 aa18.5■□□□□ 0.55
CHMP4A-201ENST00000347519 A8MT66 165 aa18.5■□□□□ 0.55
CHMP4A-201ENST00000347519 B4DGG1 531 aa18.5■□□□□ 0.55
CHMP4A-201ENST00000347519 LMO7DNF2Z398 122 aa18.5■□□□□ 0.55
CHMP4A-201ENST00000347519 FFAR2O15552 330 aa18.5■□□□□ 0.55
CHMP4A-201ENST00000347519 GUCA1CO95843 209 aa18.5■□□□□ 0.55
CHMP4A-201ENST00000347519 CATP04040 527 aaKnown RBP18.5■□□□□ 0.55
CHMP4A-201ENST00000347519 BPGMP07738 259 aa18.5■□□□□ 0.55
CHMP4A-201ENST00000347519 CPA3P15088 417 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms