RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 NEK10Q6ZWH5 1172 aa11.22□□□□□ -0.61
COL4A5-201ENST00000328300 CHST15Q7LFX5 561 aaPredicted RBP11.22□□□□□ -0.61
COL4A5-201ENST00000328300 CMTM8Q8IZV2 173 aa11.22□□□□□ -0.61
COL4A5-201ENST00000328300 OXR1Q8N573 874 aa11.22□□□□□ -0.61
COL4A5-201ENST00000328300 OR13C4Q8NGS5 318 aa11.22□□□□□ -0.61
COL4A5-201ENST00000328300 RGMAQ96B86 450 aa11.22□□□□□ -0.61
COL4A5-201ENST00000328300 WDR55Q9H6Y2 383 aaPredicted RBP11.22□□□□□ -0.61
COL4A5-201ENST00000328300 SCML1Q9UN30 329 aa11.22□□□□□ -0.61
COL4A5-201ENST00000328300 OR5K4A6NMS3 321 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 J3KR12 359 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 PIP5K1BO14986 540 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 OXTRP30559 389 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 BNC1Q01954 994 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 SOX4Q06945 474 aaPredicted RBP11.21□□□□□ -0.61
COL4A5-201ENST00000328300 SLC9A5Q14940 896 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 ZNF805Q5CZA5 627 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 FAM171BQ6P995 826 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 DCUN1D3Q8IWE4 304 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 OR8H2Q8N162 312 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 LIX1Q8N485 282 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 LINC00471Q8N535 108 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 UBR7Q8N806 425 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 TSPEARQ8WU66 669 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 CYP2S1Q96SQ9 504 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 FAM25AB3EWG3 89 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 FAM25CB3EWG5 89 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 FAM25GB3EWG6 89 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 ALDH4A1P30038 563 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 IGFALSP35858 605 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 GRIA2P42262 883 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 PTDSS1P48651 473 aaKnown RBP11.21□□□□□ -0.61
COL4A5-201ENST00000328300 PM20D1Q6GTS8 502 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 GRASPQ7Z6J2 395 aaPredicted RBP11.21□□□□□ -0.61
COL4A5-201ENST00000328300 WDR48Q8TAF3 677 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 SMARCD2Q92925 531 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 SLC38A4Q969I6 547 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 SEMA6AQ9H2E6 1030 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 ETAA1Q9NY74 926 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 COPS7AQ9UBW8 275 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 DNAJB4Q9UDY4 337 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 G3V2T6 193 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 ASNA1O43681 348 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 LRATO95237 230 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 RHOP08100 348 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 PTSQ03393 145 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 ANGPT1Q15389 498 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 CHRNA6Q15825 494 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 HID1Q8IV36 788 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 ZNF513Q8N8E2 541 aaPredicted RBP11.21□□□□□ -0.61
COL4A5-201ENST00000328300 ACAT2Q9BWD1 397 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 PHF11Q9UIL8 331 aa11.21□□□□□ -0.61
COL4A5-201ENST00000328300 PLK4O00444 970 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 RPL4P36578 427 aaKnown RBP11.21□□□□□ -0.62
COL4A5-201ENST00000328300 CLCN4P51793 760 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 ADARP55265 1226 aaKnown RBP11.21□□□□□ -0.62
COL4A5-201ENST00000328300 LIPEQ05469 1076 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 TRMT10BQ6PF06 316 aaKnown RBP11.21□□□□□ -0.62
COL4A5-201ENST00000328300 FGD2Q7Z6J4 655 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 CILP2Q8IUL8 1156 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 ZDHHC14Q8IZN3 488 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 ZCCHC7Q8N3Z6 543 aaKnown RBP11.21□□□□□ -0.62
COL4A5-201ENST00000328300 OMA1Q96E52 524 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 CLPTM1LQ96KA5 538 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 S100A13Q99584 98 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 P2RY13Q9BPV8 354 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 HOXB2P14652 356 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 RPL5P46777 297 aaKnown RBP11.21□□□□□ -0.62
COL4A5-201ENST00000328300 TRIM71Q2Q1W2 868 aaKnown RBP11.21□□□□□ -0.62
COL4A5-201ENST00000328300 FAM26DQ5JW98 314 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 ZNF781Q8N8C0 355 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 AUTS2Q8WXX7 1259 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 RBM18Q96H35 190 aaKnown RBP11.21□□□□□ -0.62
COL4A5-201ENST00000328300 ALG2Q9H553 416 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 ANKHQ9HCJ1 492 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 PCDHGA4Q9Y5G9 962 aa11.21□□□□□ -0.62
COL4A5-201ENST00000328300 AQP12BA6NM10 295 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 CHURC1-FNTBB4DL54 471 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 E7ESA3 106 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 CHST10O43529 356 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 VEGFDO43915 354 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 LILRB3O75022 631 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 FGFR3P22607 806 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 STAT5AP42229 794 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 ARRB1P49407 418 aaPredicted RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 CDK9P50750 372 aaKnown RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 ARHGAP36Q6ZRI8 547 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 LDB1Q86U70 411 aaPredicted RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 AQP12AQ8IXF9 295 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 NXPE1Q8N323 547 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 AMER2Q8N7J2 671 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 TRPV3Q8NET8 790 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 FLCNQ8NFG4 579 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 KBTBD7Q8WVZ9 684 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 AP3S1Q92572 193 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 RTP4Q96DX8 246 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 SLC35G5Q96KT7 338 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 PEBP4Q96S96 227 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 NPAS2Q99743 824 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 DPEP2Q9H4A9 486 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 ECI2O75521 394 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms