RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 VPS35Q96QK1 796 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 CYTH2Q99418 400 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 FAM117AQ9C073 453 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 IL22Q9GZX6 179 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 STN1Q9H668 368 aaKnown RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 CCDC86Q9H6F5 360 aaKnown RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ASB8Q9H765 288 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 UCK1Q9HA47 277 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 CARS2Q9HA77 564 aaKnown RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 MRM3Q9HC36 420 aaKnown RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 CYP4F12Q9HCS2 524 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 XAB2Q9HCS7 855 aaKnown RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 SPATS2LQ9NUQ6 558 aaKnown RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 SMOXQ9NWM0 555 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 EURLQ9NYK6 297 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 NINJ2Q9NZG7 142 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 AKAP7Q9P0M2 348 aaPredicted RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 SLC17A6Q9P2U8 582 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 PSMC3IPQ9P2W1 217 aaPredicted RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 LNPEPQ9UIQ6 1025 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ZNF180Q9UJW8 692 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 ACSL6Q9UKU0 697 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 SUFUQ9UMX1 484 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 SOX13Q9UN79 622 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 GPR34Q9UPC5 381 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 CLCA2Q9UQC9 943 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 MTO1Q9Y2Z2 717 aaKnown RBP5.16□□□□□ -1.58
SHMT1-211ENST00000618902 PKP3Q9Y446 797 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 IKBKGQ9Y6K9 419 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 MYO18BQ8IUG5 2567 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 BSNQ9UPA5 3926 aa5.16□□□□□ -1.58
SHMT1-211ENST00000618902 KIF26BQ2KJY2 2108 aa5.15□□□□□ -1.58
SHMT1-211ENST00000618902 CACNA1GO43497 2377 aa5.15□□□□□ -1.58
SHMT1-211ENST00000618902 A0A087WV48 116 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 KIR2DS5A0A0G2JLQ3 304 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 PRAMEF33A0A0G2JMD5 474 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 A0A0G2JNG1 304 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 FAM237BA0A1B0GVD1 139 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 HEATR9A2RTY3 570 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 A6NCN8 305 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 SDR42E2A6NKP2 422 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 ANKRD65E5RJM6 399 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 KIR2DS3K7RE56 304 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 QSOX1O00391 747 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 HGSO14964 777 aaPredicted RBP5.15□□□□□ -1.59
SHMT1-211ENST00000618902 YY2O15391 372 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 TOX3O15405 576 aaPredicted RBP5.15□□□□□ -1.59
SHMT1-211ENST00000618902 FFAR2O15552 330 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 RRP8O43159 456 aaKnown RBP5.15□□□□□ -1.59
SHMT1-211ENST00000618902 NUAK1O60285 661 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 OR1I1O60431 355 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 CCDC22O60826 627 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 SLC25A14O95258 325 aaPredicted RBP5.15□□□□□ -1.59
SHMT1-211ENST00000618902 ACSL3O95573 720 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 C1QAP02745 245 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 CAPNS1P04632 268 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 MSH2P43246 934 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 FASLGP48023 281 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 LSSP48449 732 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 EPHA4P54764 986 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 CTBSQ01459 385 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 PLOD1Q02809 727 aaPredicted RBP5.15□□□□□ -1.59
SHMT1-211ENST00000618902 ILF2Q12905 390 aaKnown RBP5.15□□□□□ -1.59
SHMT1-211ENST00000618902 KIR2DS5Q14953 304 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 ST3GAL2Q16842 350 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 LONRF1Q17RB8 773 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 DEFB133Q30KQ1 61 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 BBS9Q3SYG4 887 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 ZNF789Q5FWF6 425 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 HHATQ5VTY9 493 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 FAM91A1Q658Y4 838 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 STEAP4Q687X5 459 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 ZNF449Q6P9G9 518 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 TRMT10BQ6PF06 316 aaKnown RBP5.15□□□□□ -1.59
SHMT1-211ENST00000618902 CRTC3Q6UUV7 619 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 WASH2PQ6VEQ5 465 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 RBM44Q6ZP01 1051 aaKnown RBP5.15□□□□□ -1.59
SHMT1-211ENST00000618902 NLRP9Q7RTR0 991 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 ZNF438Q7Z4V0 828 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 SNX20Q7Z614 316 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 TMEM135Q86UB9 458 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 SLCO6A1Q86UG4 719 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 SERPINA9Q86WD7 417 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 CCDC25Q86WR0 208 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 PROSER1Q86XN7 944 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 PHYKPLQ8IUZ5 450 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 PALM2Q8IXS6 379 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 SLC35F3Q8IY50 421 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 CARFQ8N187 725 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 ARL14Q8N4G2 192 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 CHCHD4Q8N4Q1 142 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 CLDN19Q8N6F1 224 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 PPHLN1Q8NEY8 458 aaKnown RBP5.15□□□□□ -1.59
SHMT1-211ENST00000618902 GPR156Q8NFN8 814 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 LKAAEAR1Q8TD35 194 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 EPS8L3Q8TE67 593 aaKnown RBP5.15□□□□□ -1.59
SHMT1-211ENST00000618902 PATE1Q8WXA2 126 aa5.15□□□□□ -1.59
SHMT1-211ENST00000618902 ZNF669Q96BR6 464 aaPredicted RBP5.15□□□□□ -1.59
SHMT1-211ENST00000618902 SGF29Q96ES7 293 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 297.8 ms