RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 MPP3Q13368 585 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 TFDP2Q14188 446 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 SSPNQ14714 243 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 MYBPC3Q14896 1274 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 MRGPREQ86SM8 312 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 GPR135Q8IZ08 494 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 IPMKQ8NFU5 416 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 SLC35G2Q8TBE7 412 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 HM13Q8TCT9 377 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 RNF25Q96BH1 459 aaPredicted RBP18.42■□□□□ 0.54
SCARF1-204ENST00000570902 DCUN1D1Q96GG9 259 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 FSD1LQ9BXM9 530 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.42■□□□□ 0.54
SCARF1-204ENST00000570902 CRYBG3Q68DQ2 2970 aa18.42■□□□□ 0.54
SCARF1-204ENST00000570902 ZNF749O43361 778 aa18.41■□□□□ 0.54
SCARF1-204ENST00000570902 ST6GAL1P15907 406 aa18.41■□□□□ 0.54
SCARF1-204ENST00000570902 HNRNPH3P31942 346 aaKnown RBP18.41■□□□□ 0.54
SCARF1-204ENST00000570902 LMAN1P49257 510 aa18.41■□□□□ 0.54
SCARF1-204ENST00000570902 PID1Q7Z2X4 250 aa18.41■□□□□ 0.54
SCARF1-204ENST00000570902 GALNT16Q8N428 558 aa18.41■□□□□ 0.54
SCARF1-204ENST00000570902 OXNAD1Q96HP4 312 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-204ENST00000570902 FERD3LQ96RJ6 166 aa18.41■□□□□ 0.54
SCARF1-204ENST00000570902 DEF6Q9H4E7 631 aa18.41■□□□□ 0.54
SCARF1-204ENST00000570902 ASB8Q9H765 288 aa18.41■□□□□ 0.54
SCARF1-204ENST00000570902 GPN3Q9UHW5 284 aaPredicted RBP18.41■□□□□ 0.54
SCARF1-204ENST00000570902 COPG1Q9Y678 874 aaKnown RBP18.41■□□□□ 0.54
SCARF1-204ENST00000570902 C2orf81A6NN90 581 aa18.4■□□□□ 0.54
SCARF1-204ENST00000570902 C2orf74A8MZ97 194 aa18.4■□□□□ 0.54
SCARF1-204ENST00000570902 BTN3A1O00481 513 aa18.4■□□□□ 0.54
SCARF1-204ENST00000570902 KLF7O75840 302 aaPredicted RBP18.4■□□□□ 0.54
SCARF1-204ENST00000570902 SRP72O76094 671 aaKnown RBP18.4■□□□□ 0.54
SCARF1-204ENST00000570902 DCAF10Q5QP82 559 aa18.4■□□□□ 0.54
SCARF1-204ENST00000570902 ZNF385CQ66K41 422 aaPredicted RBP18.4■□□□□ 0.54
SCARF1-204ENST00000570902 DAAM2Q86T65 1068 aa18.4■□□□□ 0.54
SCARF1-204ENST00000570902 RHOT2Q8IXI1 618 aa18.4■□□□□ 0.54
SCARF1-204ENST00000570902 SLC34A3Q8N130 599 aa18.4■□□□□ 0.54
SCARF1-204ENST00000570902 ZADH2Q8N4Q0 377 aa18.4■□□□□ 0.54
SCARF1-204ENST00000570902 N4BP2L2Q92802 583 aaPredicted RBP18.4■□□□□ 0.54
SCARF1-204ENST00000570902 TRAPPC9Q96Q05 1148 aa18.4■□□□□ 0.54
SCARF1-204ENST00000570902 TFB2MQ9H5Q4 396 aaKnown RBP18.4■□□□□ 0.54
SCARF1-204ENST00000570902 SAE1Q9UBE0 346 aaPredicted RBP18.4■□□□□ 0.54
SCARF1-204ENST00000570902 ARL5AQ9Y689 179 aa18.4■□□□□ 0.54
SCARF1-204ENST00000570902 AP1M2Q9Y6Q5 423 aa18.4■□□□□ 0.54
SCARF1-204ENST00000570902 C17orf113A0A1B0GUU1 675 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 CFAP99D6REC4 459 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 F5H423 210 aaPredicted RBP18.39■□□□□ 0.53
SCARF1-204ENST00000570902 IFRD1O00458 451 aaPredicted RBP18.39■□□□□ 0.53
SCARF1-204ENST00000570902 BTN3A3O00478 584 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 LDB2O43679 373 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 FOLR3P41439 243 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 SLC1A1P43005 524 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 PRLHRP49683 370 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 PTPRCAPQ14761 206 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 TAF1AQ15573 450 aaPredicted RBP18.39■□□□□ 0.53
SCARF1-204ENST00000570902 MLIPQ5VWP3 458 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 SARM1Q6SZW1 724 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 MFSD7Q6UXD7 560 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 HOOK3Q86VS8 718 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 ZNF567Q8N184 647 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 LILRA3Q8N6C8 439 aaPredicted RBP18.39■□□□□ 0.53
SCARF1-204ENST00000570902 HEXDCQ8WVB3 486 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 P3H4Q92791 437 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 ULK4Q96C45 1275 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 RBM41Q96IZ5 413 aaKnown RBP18.39■□□□□ 0.53
SCARF1-204ENST00000570902 MVB12BQ9H7P6 319 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 AGPAT4Q9NRZ5 378 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 CRLS1Q9UJA2 301 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 PCSK5Q92824 1860 aa18.39■□□□□ 0.53
SCARF1-204ENST00000570902 CCDC66A2RUB6 948 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 C5orf60A6NFR6 353 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 SGTAO43765 313 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 CST8O60676 142 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 PECAM1P16284 738 aaPredicted RBP18.38■□□□□ 0.53
SCARF1-204ENST00000570902 TNFRSF8P28908 595 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 CDKN2BP42772 138 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 CD151P48509 253 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 ZNF449Q6P9G9 518 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 CDHR3Q6ZTQ4 885 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 AMIGO1Q86WK6 493 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 OR4K2Q8NGD2 314 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 PROKR1Q8TCW9 393 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 NAT14Q8WUY8 206 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 UBE2Q2Q8WVN8 375 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 RANBP9Q96S59 729 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 BARD1Q99728 777 aaKnown RBP18.38■□□□□ 0.53
SCARF1-204ENST00000570902 ZNF552Q9H707 407 aaPredicted RBP18.38■□□□□ 0.53
SCARF1-204ENST00000570902 VPS37BQ9H9H4 285 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 NDOR1Q9UHB4 597 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 RSPH14Q9UHP6 348 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 FKBPLQ9UIM3 349 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 TRHDEQ9UKU6 1024 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 PTRH2Q9Y3E5 179 aaKnown RBP18.38■□□□□ 0.53
SCARF1-204ENST00000570902 PCDHGA10Q9Y5H3 936 aa18.38■□□□□ 0.53
SCARF1-204ENST00000570902 LRBAP50851 2863 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 AGAP14A8MT82 685 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 AKR1B10O60218 316 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 OR2B3O76000 313 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 TNNT1P13805 278 aa18.37■□□□□ 0.53
SCARF1-204ENST00000570902 ATP1B2P14415 290 aaPredicted RBP18.37■□□□□ 0.53
SCARF1-204ENST00000570902 PVRP15151 417 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms