RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 ZDHHC1Q8WTX9 485 aa25.37■■□□□ 1.65
NME3-208ENST00000565379 NXPE2Q96DL1 559 aa25.37■■□□□ 1.65
NME3-208ENST00000565379 VPS39Q96JC1 886 aa25.37■■□□□ 1.65
NME3-208ENST00000565379 EPB41L4BQ9H329 900 aa25.37■■□□□ 1.65
NME3-208ENST00000565379 TBC1D29Q9UFV1 150 aa25.37■■□□□ 1.65
NME3-208ENST00000565379 EXOC1LA0A1B0GW35 172 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 SLC5A10A0PJK1 596 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 A6NCN8 305 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 PDZK1P1A8MUH7 402 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 NIPSNAP2O75323 286 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 INHBAP08476 426 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 MSH2P43246 934 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 SERPINB9P50453 376 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 LIMK2P53671 638 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 E2F1Q01094 437 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 POU4F1Q01851 419 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 HECTD2Q5U5R9 776 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 TAOK1Q7L7X3 1001 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 GPATCH11Q8N954 259 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 SLC44A1Q8WWI5 657 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 ZNF180Q9UJW8 692 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 AK5Q9Y6K8 562 aa25.36■■□□□ 1.65
NME3-208ENST00000565379 EIF3FO00303 357 aaPredicted RBP25.35■■□□□ 1.65
NME3-208ENST00000565379 SNX2O60749 519 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 GPC4O75487 556 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 SLC35G4P0C7Q5 338 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 ITGB6P18564 788 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 CNTFP26441 200 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 ATP5DP30049 168 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 HSD17B3P37058 310 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 CLCN7P51798 805 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 BOP1Q14137 746 aaKnown RBP25.35■■□□□ 1.65
NME3-208ENST00000565379 UBAP2Q5T6F2 1119 aaKnown RBP25.35■■□□□ 1.65
NME3-208ENST00000565379 IYDQ6PHW0 289 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 FAM83HQ6ZRV2 1179 aaPredicted RBP25.35■■□□□ 1.65
NME3-208ENST00000565379 OR6C4Q8NGE1 309 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 MAPK15Q8TD08 544 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 LKAAEAR1Q8TD35 194 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 INPP5DQ92835 1189 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 TSPAN17Q96FV3 270 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 DCBLD2Q96PD2 775 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 NDNQ99608 321 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 GPR22Q99680 433 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 PRDM8Q9NQV8 689 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 TRMT6Q9UJA5 497 aaKnown RBP25.35■■□□□ 1.65
NME3-208ENST00000565379 DHRS7Q9Y394 339 aa25.35■■□□□ 1.65
NME3-208ENST00000565379 PIKFYVEQ9Y2I7 2098 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 FAM95CA0A1B0GW59 222 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 IFRD1O00458 451 aaPredicted RBP25.34■■□□□ 1.65
NME3-208ENST00000565379 PIAS1O75925 651 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 SLCO2B1O94956 709 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 F7P08709 466 aaPredicted RBP25.34■■□□□ 1.65
NME3-208ENST00000565379 CBSLP0DN79 551 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 CBSP35520 551 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 SLC12A2P55011 1212 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 HSPA14Q0VDF9 509 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 RTP5Q14D33 572 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 EFTUD2Q15029 972 aaKnown RBP eCLIP25.34■■□□□ 1.656e-11■■■■■ 37.4
NME3-208ENST00000565379 LGSNQ5TDP6 509 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 LRRC8EQ6NSJ5 796 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 C17orf82Q86X59 251 aaPredicted RBP25.34■■□□□ 1.65
NME3-208ENST00000565379 SFTPA2Q8IWL1 248 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 ZBTB2Q8N680 514 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 KYQ8NBH2 561 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 GPR156Q8NFN8 814 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 UHMK1Q8TAS1 419 aaKnown RBP25.34■■□□□ 1.65
NME3-208ENST00000565379 ELMO2Q96JJ3 720 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 PAFAH2Q99487 392 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 STN1Q9H668 368 aaKnown RBP25.34■■□□□ 1.65
NME3-208ENST00000565379 POPDC3Q9HBV1 291 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 SIRPGQ9P1W8 387 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 SLC24A2Q9UI40 661 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 MED16Q9Y2X0 877 aa25.34■■□□□ 1.65
NME3-208ENST00000565379 B4DGG1 531 aa25.33■■□□□ 1.65
NME3-208ENST00000565379 BRINP1O60477 761 aa25.33■■□□□ 1.65
NME3-208ENST00000565379 ENO3P13929 434 aaPredicted RBP25.33■■□□□ 1.65
NME3-208ENST00000565379 FDXRP22570 491 aa25.33■■□□□ 1.65
NME3-208ENST00000565379 DUSP3P51452 185 aaPredicted RBP25.33■■□□□ 1.65
NME3-208ENST00000565379 NR0B2Q15466 257 aa25.33■■□□□ 1.65
NME3-208ENST00000565379 UAP1Q16222 522 aaPredicted RBP25.33■■□□□ 1.65
NME3-208ENST00000565379 RBM20Q5T481 1227 aaKnown RBP25.33■■□□□ 1.65
NME3-208ENST00000565379 SLC9B2Q86UD5 537 aa25.33■■□□□ 1.65
NME3-208ENST00000565379 SLC22A15Q8IZD6 547 aa25.33■■□□□ 1.65
NME3-208ENST00000565379 NAGSQ8N159 534 aa25.33■■□□□ 1.65
NME3-208ENST00000565379 SFRP1Q8N474 314 aa25.33■■□□□ 1.65
NME3-208ENST00000565379 GPR21Q99679 349 aa25.33■■□□□ 1.65
NME3-208ENST00000565379 NRSN2Q9GZP1 204 aa25.33■■□□□ 1.65
NME3-208ENST00000565379 OR52A5Q9H2C5 316 aa25.33■■□□□ 1.65
NME3-208ENST00000565379 SARS2Q9NP81 518 aaKnown RBP25.33■■□□□ 1.65
NME3-208ENST00000565379 FAM8A1Q9UBU6 413 aa25.33■■□□□ 1.65
NME3-208ENST00000565379 HEBP2Q9Y5Z4 205 aa25.33■■□□□ 1.65
NME3-208ENST00000565379 CSO75390 466 aaKnown RBP25.32■■□□□ 1.64
NME3-208ENST00000565379 KRT38O76015 456 aa25.32■■□□□ 1.64
NME3-208ENST00000565379 GP1BAP07359 652 aa25.32■■□□□ 1.64
NME3-208ENST00000565379 ITGA2BP08514 1039 aa25.32■■□□□ 1.64
NME3-208ENST00000565379 NUDT17P0C025 328 aa25.32■■□□□ 1.64
NME3-208ENST00000565379 XRCC1P18887 633 aaPredicted RBP25.32■■□□□ 1.64
NME3-208ENST00000565379 RPL10P27635 214 aaKnown RBP25.32■■□□□ 1.64
NME3-208ENST00000565379 MAPK9P45984 424 aa25.32■■□□□ 1.64
NME3-208ENST00000565379 PDAP1Q13442 181 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms