RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 ZWINTO95229 277 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 ICAM1P05362 532 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 ASGR1P07306 291 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 SNRNP70P08621 437 aaKnown RBP6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 CYP2A6P11509 494 aaPredicted RBP6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 EEF2P13639 858 aaKnown RBP6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 RFC1P35251 1148 aaPredicted RBP6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 PLA2G5P39877 138 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 PRKCIP41743 596 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 RARRES1P49788 294 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 SLC12A2P55011 1212 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 SLC20A2Q08357 652 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 LPIN1Q14693 890 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 SMU1Q2TAY7 513 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 LEXMQ3ZCV2 418 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 ATP13A5Q4VNC0 1218 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 EARS2Q5JPH6 523 aaKnown RBP6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 ENTPD8Q5MY95 495 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 TMEM211Q6ICI0 200 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 LINC00696Q6ZRV3 163 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 TMEM179Q6ZVK1 233 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 HAUS6Q7Z4H7 955 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 GRASPQ7Z6J2 395 aaPredicted RBP6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 CENPVQ7Z7K6 275 aaPredicted RBP6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 FAM217AQ8IXS0 508 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 SLC25A41Q8N5S1 370 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 CAGE1Q8TC20 777 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 EXOC4Q96A65 974 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 NUDCD1Q96RS6 583 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 CDK5RAP1Q96SZ6 601 aaKnown RBP6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 PCGF1Q9BSM1 259 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 BDH2Q9BUT1 245 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 ABHD6Q9BV23 337 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 MLPHQ9BV36 600 aaPredicted RBP6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 PIGMQ9H3S5 423 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 IL1RAPL2Q9NP60 686 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 SPAG4Q9NPE6 437 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 LARSQ9P2J5 1176 aaKnown RBP6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 UBA2Q9UBT2 640 aaPredicted RBP6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 SERGEFQ9UGK8 458 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 IL17BQ9UHF5 180 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 UTS2RQ9UKP6 389 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 RAP2CQ9Y3L5 183 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 TSC22D4Q9Y3Q8 395 aa6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.09□□□□□ -1.44
TGFBR1-208ENST00000550253 DPPA5A6NC42 116 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 RHODO00212 210 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 SMAD9O15198 467 aaKnown RBP6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 KINO60870 393 aaKnown RBP6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 SLC25A27O95847 323 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 ZFYP08048 801 aaPredicted RBP6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 NHLRC4P0CG21 123 aaPredicted RBP6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 ACTN3Q08043 901 aaPredicted RBP6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 SMC1AQ14683 1233 aaKnown RBP6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 PNLIPRP3Q17RR3 467 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 AKNAD1Q5T1N1 836 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 NCAPH2Q6IBW4 605 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 TEX38Q6PEX7 206 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 PPP1R21Q6ZMI0 780 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 MTERF4Q7Z6M4 381 aaKnown RBP6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 TUSC5Q8IXB3 177 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 C10orf53Q8N6V4 93 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 LRRC57Q8N9N7 239 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 SLC9A6Q92581 669 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 ZNF419Q96HQ0 510 aaPredicted RBP6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 DACH2Q96NX9 599 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 TIMP4Q99727 224 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 FERMT1Q9BQL6 677 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 ACAT2Q9BWD1 397 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 YY1AP1Q9H869 796 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 NOL11Q9H8H0 719 aaKnown RBP6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 CYP4F11Q9HBI6 524 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 EPB41L5Q9HCM4 733 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 MKKSQ9NPJ1 570 aaPredicted RBP6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 PNRC2Q9NPJ4 139 aaKnown RBP6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 RNF146Q9NTX7 359 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 THEGQ9P2T0 379 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 KCNK7Q9Y2U2 307 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 TRIOO75962 3097 aa6.08□□□□□ -1.44
TGFBR1-208ENST00000550253 GRIN2DO15399 1336 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 TANC1Q9C0D5 1861 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 EPOPA6NHQ4 379 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 C2CD4BA6NLJ0 364 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 KDM4EB2RXH2 506 aaPredicted RBP6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 DDX39AO00148 427 aaKnown RBP6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 RGS11O94810 467 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 TFPIP10646 304 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 TCEA1P23193 301 aaKnown RBP6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 DNASE1P24855 282 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 DCTDP32321 178 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 MATR3P43243 847 aaKnown RBP eCLIP6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 SIRPAP78324 504 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 BEX3Q00994 111 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 FAM27E3Q08E93 113 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 GLRA4Q5JXX5 417 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 C12orf60Q5U649 245 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 SNRNP48Q6IEG0 339 aaKnown RBP6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 ANKRD54Q6NXT1 300 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 DSG4Q86SJ6 1040 aa6.07□□□□□ -1.44
TGFBR1-208ENST00000550253 SDCCAG8Q86SQ7 713 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms