RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 RHOT2Q8IXI1 618 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 KLHL7Q8IXQ5 586 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 LRRC57Q8N9N7 239 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 EIF1ADQ8N9N8 165 aaKnown RBP9.48□□□□□ -0.89
CHFR-220ENST00000541817 GPR150Q8NGU9 434 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 JOSD2Q8TAC2 188 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 FAM76AQ8TAV0 307 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 IFT81Q8WYA0 676 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 CXorf40BQ96DE9 158 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 NAP1L3Q99457 506 aaPredicted RBP9.48□□□□□ -0.89
CHFR-220ENST00000541817 RETREG1Q9H6L5 497 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 LRRC19Q9H756 370 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 SLC6A20Q9NP91 592 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 PLA2G3Q9NZ20 509 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 DTLQ9NZJ0 730 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 PACSIN2Q9UNF0 486 aaPredicted RBP9.48□□□□□ -0.89
CHFR-220ENST00000541817 NUP210LQ5VU65 1888 aa9.48□□□□□ -0.89
CHFR-220ENST00000541817 FN1P02751 2386 aaKnown RBP9.48□□□□□ -0.89
CHFR-220ENST00000541817 CNTRLQ7Z7A1 2325 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 TMEM150CB9EJG8 249 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 C9J4A7 227 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 PSMD11O00231 422 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 FOXN3O00409 490 aaPredicted RBP9.47□□□□□ -0.89
CHFR-220ENST00000541817 HTRA2O43464 458 aaPredicted RBP9.47□□□□□ -0.89
CHFR-220ENST00000541817 PDHA1P08559 390 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 CYP2A7P20853 494 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 IL4RP24394 825 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 ADSLP30566 484 aaPredicted RBP9.47□□□□□ -0.89
CHFR-220ENST00000541817 FOLR3P41439 243 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 GABRB2P47870 512 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 MEOX1P50221 254 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 CUL1Q13616 776 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 INSCQ1MX18 579 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 TUBB8Q3ZCM7 444 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 AGAP7PQ5VUJ5 663 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 B4GALNT4Q76KP1 1039 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 MAATS1Q7Z4T9 603 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 BIVMQ86UB2 503 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 NT5DC3Q86UY8 548 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 UMODL1-AS1Q8N2C9 162 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 PGBD5Q8N414 524 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 RASGEF1CQ8N431 466 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 AVL9Q8NBF6 648 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 SLC35G2Q8TBE7 412 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 FAM81BQ96LP2 452 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 AGAP4Q96P64 663 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 RAB33BQ9H082 229 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 KLHL25Q9H0H3 589 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 OR2AG1Q9H205 316 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 SP110Q9HB58 689 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 NOD2Q9HC29 1040 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 FBXL4Q9UKA2 621 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 CDYLQ9Y232 598 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 WDR37Q9Y2I8 494 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 PADI2Q9Y2J8 665 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 ABCA4P78363 2273 aa9.47□□□□□ -0.89
CHFR-220ENST00000541817 JMJD1CQ15652 2540 aa9.46□□□□□ -0.89
CHFR-220ENST00000541817 GOLGA6L10A0A0M3HER8 536 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 TLCD2A6NGC4 264 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 SLC9B1P1A6NJY1 282 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 DFFAO00273 331 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 RAD51CO43502 376 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 NUAK1O60285 661 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 SLC19A2O60779 497 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 UMODP07911 640 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 AGAP20933 346 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 MAXP61244 160 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 AP1S1P61966 158 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 MRPS25P82663 173 aaKnown RBP9.46□□□□□ -0.9
CHFR-220ENST00000541817 PMP22Q01453 160 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 SLC10A7Q0GE19 358 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 AIMP2Q13155 320 aaKnown RBP9.46□□□□□ -0.9
CHFR-220ENST00000541817 PLCL1Q15111 1095 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 ZSCAN26Q16670 478 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.46□□□□□ -0.9
CHFR-220ENST00000541817 ZNF789Q5FWF6 425 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 TMTC4Q5T4D3 741 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 PRAMEF13Q5VWM6 474 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 ZNF385CQ66K41 422 aaPredicted RBP9.46□□□□□ -0.9
CHFR-220ENST00000541817 RPUSD3Q6P087 351 aaKnown RBP9.46□□□□□ -0.9
CHFR-220ENST00000541817 SCYL2Q6P3W7 929 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 C3P1Q6ZMU1 363 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 TRIM72Q6ZMU5 477 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 MREGQ8N565 214 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 UBL4BQ8N7F7 174 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 ACBD4Q8NC06 268 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 WFDC11Q8NEX6 87 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 FAM172AQ8WUF8 416 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 CPA5Q8WXQ8 436 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 LRRC45Q96CN5 670 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 SCRN2Q96FV2 425 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 HES6Q96HZ4 224 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 THOC3Q96J01 351 aaKnown RBP9.46□□□□□ -0.9
CHFR-220ENST00000541817 IP6K3Q96PC2 410 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 ZNF559Q9BR84 538 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 TRIM56Q9BRZ2 755 aaKnown RBP9.46□□□□□ -0.9
CHFR-220ENST00000541817 ISCUQ9H1K1 167 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 EPS8L2Q9H6S3 715 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 FAM114A2Q9NRY5 505 aa9.46□□□□□ -0.9
CHFR-220ENST00000541817 POT1Q9NUX5 634 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms