RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 ZNF24P17028 368 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 ZNF8P17098 575 aaPredicted RBP3.18□□□□□ -1.9
TCOF1-208ENST00000506063 TFEBP19484 476 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 ACVR2AP27037 513 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 VIPR1P32241 457 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 LONP1P36776 959 aaKnown RBP3.18□□□□□ -1.9
TCOF1-208ENST00000506063 CD96P40200 585 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 PREPP48147 710 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 CSNK1DP48730 415 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 MAPKAPK2P49137 400 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 ASCL1P50553 236 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 DRG2P55039 364 aaKnown RBP3.18□□□□□ -1.9
TCOF1-208ENST00000506063 PTSQ03393 145 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 TAP2Q03519 686 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 CEBPZQ03701 1054 aaKnown RBP3.18□□□□□ -1.9
TCOF1-208ENST00000506063 CUL2Q13617 745 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 GALNT3Q14435 633 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 GRM3Q14832 879 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 ZIC1Q15915 447 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 RBBP7Q16576 425 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 OCLNQ16625 522 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 KNOP1Q1ED39 458 aaKnown RBP3.18□□□□□ -1.9
TCOF1-208ENST00000506063 CLEC12BQ2HXU8 276 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 RILPL1Q5EBL4 403 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 ZNF648Q5T619 568 aaPredicted RBP3.18□□□□□ -1.9
TCOF1-208ENST00000506063 GPRC6AQ5T6X5 926 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 FAM72AQ5TYM5 149 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 LIPNQ5VXI9 398 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 FBXW10Q5XX13 1052 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 DENND2CQ68D51 928 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 MCTP1Q6DN14 999 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 TXNRD3NBQ6F5E7 133 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 SPINK14Q6IE38 97 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 FAM72DQ6L9T8 149 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 TRNP1Q6NT89 227 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 H3F3CQ6NXT2 135 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 DENND1BQ6P3S1 775 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 CNNM4Q6P4Q7 775 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 RIPOR1Q6ZS17 1223 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 SV2BQ7L1I2 683 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 WDR53Q7Z5U6 358 aaPredicted RBP3.18□□□□□ -1.9
TCOF1-208ENST00000506063 FAM72BQ86X60 149 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 ARHGAP12Q8IWW6 846 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 TRIM48Q8IWZ4 208 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 ELOA2Q8IYF1 753 aaPredicted RBP3.18□□□□□ -1.9
TCOF1-208ENST00000506063 BEST3Q8N1M1 668 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 C3orf56Q8N813 242 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 TSEN2Q8NCE0 465 aaKnown RBP3.18□□□□□ -1.9
TCOF1-208ENST00000506063 SUN3Q8TAQ9 357 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 CCDC110Q8TBZ0 833 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 STK32AQ8WU08 396 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 AP2M1Q96CW1 435 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 MARK4Q96L34 752 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 OLFM1Q99784 485 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 NCAPGQ9BPX3 1015 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 PIGQQ9BRB3 760 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 CARD9Q9H257 536 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 KCTD10Q9H3F6 313 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 CUEDC2Q9H467 287 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 OSGEPL1Q9H4B0 414 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 SOX17Q9H6I2 414 aaPredicted RBP3.18□□□□□ -1.9
TCOF1-208ENST00000506063 FANCEQ9HB96 536 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 FAM207AQ9NSI2 230 aaPredicted RBP3.18□□□□□ -1.9
TCOF1-208ENST00000506063 TMEM248Q9NWD8 314 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 ASNSD1Q9NWL6 643 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 HRASLS2Q9NWW9 162 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 KCTD5Q9NXV2 234 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 GOLGA6AQ9NYA3 693 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 TAS2R14Q9NYV8 317 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 CGNQ9P2M7 1197 aaKnown RBP3.18□□□□□ -1.9
TCOF1-208ENST00000506063 DNAI1Q9UI46 699 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 SERTAD3Q9UJW9 196 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 KIAA1257Q9ULG3 409 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 GTF3C3Q9Y5Q9 886 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 AP1M2Q9Y6Q5 423 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 CSMD3Q7Z407 3707 aa3.18□□□□□ -1.9
TCOF1-208ENST00000506063 HEATR5BQ9P2D3 2071 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 SLC35F4A4IF30 521 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 OR6C74A6NCV1 312 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 PDZK1P1A8MUH7 402 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 WASH4PA8MWX3 477 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 EIF3CLB5ME19 914 aaKnown RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 J3KR12 359 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ZSCAN9O15535 394 aaPredicted RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 NME2P1O60361 137 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 RAMP2O60895 175 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 HSF2BPO75031 334 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 DAB1O75553 588 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 OR2B3O76000 313 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 MED26O95402 600 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ASMTLO95671 621 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 BMP15O95972 392 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 GLI1P08151 1106 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 TMIGD3P0DMS9 266 aaPredicted RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 PIM1P11309 404 aaPredicted RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ACPPP15309 386 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 ZNF7P17097 686 aaPredicted RBP3.17□□□□□ -1.9
TCOF1-208ENST00000506063 FPR1P21462 350 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 NME2P22392 152 aa3.17□□□□□ -1.9
TCOF1-208ENST00000506063 SERPINA4P29622 427 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms