RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 TPMTP51580 245 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 NCALDP61601 193 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 PPP2CBP62714 309 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 PPP2CAP67775 309 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 BTKQ06187 659 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 ACTN3Q08043 901 aaPredicted RBP9.18□□□□□ -0.94
VPS52-216ENST00000471309 INPP5AQ14642 412 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 RBBP7Q16576 425 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 UGT3A2Q3SY77 523 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 TBC1D3GQ6DHY5 549 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 TBC1D3CQ6IPX1 549 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 XKR5Q6UX68 686 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 Q6ZS52 159 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 GPRIN3Q6ZVF9 776 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 SYT13Q7L8C5 426 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 LRRC70Q7Z2Q7 622 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 EFL1Q7Z2Z2 1120 aaKnown RBP9.18□□□□□ -0.94
VPS52-216ENST00000471309 GOLGA7Q7Z5G4 137 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 C11orf96Q7Z7L8 435 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 LRRTM4Q86VH4 590 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 ADHFE1Q8IWW8 467 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 HOMEZQ8IX15 550 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 TBC1D3Q8IZP1 549 aaPredicted RBP9.18□□□□□ -0.94
VPS52-216ENST00000471309 CLYBLQ8N0X4 340 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 DEFB123Q8N688 67 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 FBXO15Q8NCQ5 510 aaPredicted RBP9.18□□□□□ -0.94
VPS52-216ENST00000471309 DENND6BQ8NEG7 585 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 OR2T34Q8NGX1 318 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 ACTRT2Q8TDY3 377 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 FOXJ1Q92949 421 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 HIST1H2AHQ96KK5 128 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 OR52B2Q96RD2 323 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 HIST1H2AJQ99878 128 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 H2AFJQ9BTM1 129 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 HGH1Q9BTY7 390 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 TUBB6Q9BUF5 446 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 CCDC106Q9BWC9 280 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 OSBPL6Q9BZF3 934 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 CD244Q9BZW8 370 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 DPEP2Q9H4A9 486 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 SGK2Q9HBY8 427 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 USP36Q9P275 1121 aaKnown RBP9.18□□□□□ -0.94
VPS52-216ENST00000471309 ARMCX1Q9P291 453 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 OPTCQ9UBM4 332 aa9.18□□□□□ -0.94
VPS52-216ENST00000471309 DNMT3AQ9Y6K1 912 aaPredicted RBP9.18□□□□□ -0.94
VPS52-216ENST00000471309 GOLGA8QA0A0J9YX86 632 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 GOLGA8OA6NCC3 632 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 PRR23AA6NEV1 266 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 LRRC72A6NJI9 287 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 CAPN14A8MX76 684 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 E9PBE3 544 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 GOLGA8NF8WBI6 632 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 H3BM21 787 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 K7EPI3 171 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 PPP6CO00743 305 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 OR7A17O14581 309 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 SLC22A2O15244 555 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 KLHL41O60662 606 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 KATNA1O75449 491 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 SKAP2O75563 359 aaPredicted RBP9.17□□□□□ -0.94
VPS52-216ENST00000471309 POP7O75817 140 aaKnown RBP9.17□□□□□ -0.94
VPS52-216ENST00000471309 DNAJC8O75937 253 aaPredicted RBP9.17□□□□□ -0.94
VPS52-216ENST00000471309 CHEK2O96017 543 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 OTCP00480 354 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 CATP04040 527 aaKnown RBP9.17□□□□□ -0.94
VPS52-216ENST00000471309 UROSP10746 265 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 AOC1P19801 751 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 TARSP26639 723 aaKnown RBP9.17□□□□□ -0.94
VPS52-216ENST00000471309 MAP4P27816 1152 aaKnown RBP9.17□□□□□ -0.94
VPS52-216ENST00000471309 EPHA3P29320 983 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 SLC6A12P48065 614 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 HSPA7P48741 367 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 ARHGAP8P85298 464 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 ZP2Q05996 745 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 RPA4Q13156 261 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 GTF2H2Q13888 395 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 UBAP2LQ14157 1087 aaKnown RBP9.17□□□□□ -0.94
VPS52-216ENST00000471309 C18orf21Q32NC0 220 aaPredicted RBP9.17□□□□□ -0.94
VPS52-216ENST00000471309 LSM12Q3MHD2 195 aaKnown RBP9.17□□□□□ -0.94
VPS52-216ENST00000471309 FBXO48Q5FWF7 155 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.17□□□□□ -0.94
VPS52-216ENST00000471309 CLEC6AQ6EIG7 209 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 GTF2H2CQ6P1K8 395 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 DOK6Q6PKX4 331 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 CRTC3Q6UUV7 619 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 UNC5DQ6UXZ4 953 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 MBOAT1Q6ZNC8 495 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 SYVN1Q86TM6 617 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 KLHDC8AQ8IYD2 350 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 LILRA3Q8N6C8 439 aaPredicted RBP9.17□□□□□ -0.94
VPS52-216ENST00000471309 MCOLN3Q8TDD5 553 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 TWIST2Q8WVJ9 160 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 FBXL8Q96CD0 374 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 C19orf60Q96EN9 201 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 PTCD3Q96EY7 689 aaKnown RBP9.17□□□□□ -0.94
VPS52-216ENST00000471309 SHDQ96IW2 340 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 FOPNLQ96NB1 174 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 LGR4Q9BXB1 951 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 BTBD1Q9H0C5 482 aa9.17□□□□□ -0.94
VPS52-216ENST00000471309 LRMDAQ9H2I8 198 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms