RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 GBX1Q14549 363 aa27.28■■□□□ 1.96
SMARCC1-203ENST00000454240 MAP9Q49MG5 647 aa27.28■■□□□ 1.96
SMARCC1-203ENST00000454240 B3GNT8Q7Z7M8 397 aa27.28■■□□□ 1.96
SMARCC1-203ENST00000454240 SLITRK4Q8IW52 837 aa27.28■■□□□ 1.96
SMARCC1-203ENST00000454240 PHC3Q8NDX5 983 aa27.28■■□□□ 1.96
SMARCC1-203ENST00000454240 KCNJ9Q92806 393 aa27.28■■□□□ 1.96
SMARCC1-203ENST00000454240 LRRC4CQ9HCJ2 640 aa27.28■■□□□ 1.96
SMARCC1-203ENST00000454240 ZFATQ9P243 1243 aa27.28■■□□□ 1.96
SMARCC1-203ENST00000454240 KLHL42Q9P2K6 505 aa27.28■■□□□ 1.96
SMARCC1-203ENST00000454240 SLC24A2Q9UI40 661 aa27.28■■□□□ 1.96
SMARCC1-203ENST00000454240 KIF26BQ2KJY2 2108 aa27.28■■□□□ 1.96
SMARCC1-203ENST00000454240 E5RI56 91 aa27.27■■□□□ 1.96
SMARCC1-203ENST00000454240 UBXN7O94888 489 aa27.27■■□□□ 1.96
SMARCC1-203ENST00000454240 HOXB3P14651 431 aaPredicted RBP27.27■■□□□ 1.96
SMARCC1-203ENST00000454240 CCKBRP32239 447 aa27.27■■□□□ 1.96
SMARCC1-203ENST00000454240 CUL1Q13616 776 aa27.27■■□□□ 1.96
SMARCC1-203ENST00000454240 KRT33BQ14525 404 aa27.27■■□□□ 1.96
SMARCC1-203ENST00000454240 TMEM71Q6P5X7 295 aa27.27■■□□□ 1.96
SMARCC1-203ENST00000454240 WDR74Q6RFH5 385 aaPredicted RBP27.27■■□□□ 1.96
SMARCC1-203ENST00000454240 RELL1Q8IUW5 271 aa27.27■■□□□ 1.96
SMARCC1-203ENST00000454240 OR4D9Q8NGE8 314 aa27.27■■□□□ 1.96
SMARCC1-203ENST00000454240 FAM136AQ96C01 138 aa27.27■■□□□ 1.96
SMARCC1-203ENST00000454240 TMEM74Q96NL1 305 aa27.27■■□□□ 1.96
SMARCC1-203ENST00000454240 TSPYL1Q9H0U9 437 aa27.27■■□□□ 1.96
SMARCC1-203ENST00000454240 SMYD2Q9NRG4 433 aa27.27■■□□□ 1.96
SMARCC1-203ENST00000454240 TCRBV9S1A1TA0A576 114 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 PROS1P07225 676 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 RHOXF2BP0C7M4 288 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 MAPK9P45984 424 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 INHBCP55103 352 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 CEP128Q6ZU80 1094 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 SLC26A11Q86WA9 606 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 IFT20Q8IY31 132 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 ACVR1CQ8NER5 493 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 NCSTNQ92542 709 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 FMO2Q99518 471 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 RHOXF2Q9BQY4 288 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 SEMA6CQ9H3T2 930 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 PDP2Q9P2J9 529 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 ASF1AQ9Y294 204 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 PSAT1Q9Y617 370 aa27.26■■□□□ 1.95
SMARCC1-203ENST00000454240 TMX2-CTNND1H3BSU7 103 aa27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 C1QAP02745 245 aa27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 TYRP1P17643 537 aa27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 AMD1P17707 334 aa27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 DEKP35659 375 aaKnown RBP27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 LIMK2P53671 638 aa27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 TBC1D21Q8IYX1 336 aa27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 ZBTB2Q8N680 514 aa27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 OR5AR1Q8NGP9 310 aa27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 JPH3Q8WXH2 748 aaPredicted RBP27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 ATXN7L3BQ96GX2 97 aa27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 SLC30A3Q99726 388 aa27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 NSMCE4AQ9NXX6 385 aa27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 TMEM9Q9P0T7 183 aa27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 CORO1CQ9ULV4 474 aaPredicted RBP27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 DHRS7Q9Y394 339 aa27.25■■□□□ 1.95
SMARCC1-203ENST00000454240 AKAP13Q12802 2813 aa27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 IGHV5-10-1A0A0J9YXX1 117 aa27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 ATP5DP30049 168 aa27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 ABCG1P45844 678 aa27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 TIAL1Q01085 375 aaKnown RBP eCLIP27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 ABRQ12979 859 aa27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 PLCL1Q15111 1095 aa27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 RBM20Q5T481 1227 aaKnown RBP27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 SIDT2Q8NBJ9 832 aaKnown RBP27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 OR5K2Q8NHB8 316 aa27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 GIMAP7Q8NHV1 300 aa27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 RSC1A1Q92681 617 aa27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 NDNQ99608 321 aa27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 RAB33BQ9H082 229 aa27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 TRIT1Q9H3H1 467 aaKnown RBP27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 TFB2MQ9H5Q4 396 aaKnown RBP27.24■■□□□ 1.95
SMARCC1-203ENST00000454240 FAM159BA6NKW6 160 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 CXorf49A8MYA2 514 aaPredicted RBP27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 SPAG6O75602 509 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 CD9P21926 228 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 CAPZBP47756 277 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 PPM1FP49593 454 aaPredicted RBP27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 PRKG2Q13237 762 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 ACSBG2Q5FVE4 666 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 UNC5DQ6UXZ4 953 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 STRA8Q7Z7C7 330 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 CDKL2Q92772 493 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 GATA6Q92908 595 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 LIN37Q96GY3 246 aaPredicted RBP27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 GPR21Q99679 349 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 MCMBPQ9BTE3 642 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 TMEM121BQ9BXQ6 578 aaPredicted RBP27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 NRSN2Q9GZP1 204 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 POLG2Q9UHN1 485 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 WDFY3Q8IZQ1 3526 aa27.23■■□□□ 1.95
SMARCC1-203ENST00000454240 MN1Q10571 1320 aaPredicted RBP27.22■■□□□ 1.95
SMARCC1-203ENST00000454240 TRABD2BA6NFA1 517 aa27.22■■□□□ 1.95
SMARCC1-203ENST00000454240 VPS26AO75436 327 aa27.22■■□□□ 1.95
SMARCC1-203ENST00000454240 PIAS1O75925 651 aa27.22■■□□□ 1.95
SMARCC1-203ENST00000454240 THRAP10827 490 aa27.22■■□□□ 1.95
SMARCC1-203ENST00000454240 ZC3HC1Q86WB0 502 aaKnown RBP27.22■■□□□ 1.95
SMARCC1-203ENST00000454240 PLXDC1Q8IUK5 500 aa27.22■■□□□ 1.95
SMARCC1-203ENST00000454240 OR52E1Q8NGJ3 308 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms