RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 GTF2A1LQ9UNN4 478 aa3.08□□□□□ -1.92
PTPN4-205ENST00000433888 KLF2Q9Y5W3 355 aaPredicted RBP3.08□□□□□ -1.92
PTPN4-205ENST00000433888 LOC101059948A0A1B0GTJ6 334 aa3.07□□□□□ -1.92
PTPN4-205ENST00000433888 FAM237BA0A1B0GVD1 139 aa3.07□□□□□ -1.92
PTPN4-205ENST00000433888 A0A1W2PN81 502 aa3.07□□□□□ -1.92
PTPN4-205ENST00000433888 OGG1O15527 345 aa3.07□□□□□ -1.92
PTPN4-205ENST00000433888 CHRNA7P36544 502 aa3.07□□□□□ -1.92
PTPN4-205ENST00000433888 GALCP54803 685 aa3.07□□□□□ -1.92
PTPN4-205ENST00000433888 GSCP56915 257 aaPredicted RBP3.07□□□□□ -1.92
PTPN4-205ENST00000433888 LRMPQ12912 555 aa3.07□□□□□ -1.92
PTPN4-205ENST00000433888 PEX6Q13608 980 aa3.07□□□□□ -1.92
PTPN4-205ENST00000433888 SIM2Q14190 667 aaPredicted RBP3.07□□□□□ -1.92
PTPN4-205ENST00000433888 HEATR4Q86WZ0 1026 aa3.07□□□□□ -1.92
PTPN4-205ENST00000433888 LACC1Q8IV20 430 aa3.07□□□□□ -1.92
PTPN4-205ENST00000433888 CPSF7Q8N684 471 aaKnown RBP3.07□□□□□ -1.92
PTPN4-205ENST00000433888 KBTBD8Q8NFY9 601 aa3.07□□□□□ -1.92
PTPN4-205ENST00000433888 ZKSCAN4Q969J2 545 aaPredicted RBP3.07□□□□□ -1.92
PTPN4-205ENST00000433888 RRP36Q96EU6 259 aaKnown RBP3.07□□□□□ -1.92
PTPN4-205ENST00000433888 RAB11FIP5Q9BXF6 653 aa3.07□□□□□ -1.92
PTPN4-205ENST00000433888 NPAP1Q9NZP6 1156 aa3.07□□□□□ -1.92
PTPN4-205ENST00000433888 RIPK3Q9Y572 518 aa3.07□□□□□ -1.92
PTPN4-205ENST00000433888 SCAMP1O15126 338 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 PRKRAO75569 313 aaKnown RBP3.06□□□□□ -1.92
PTPN4-205ENST00000433888 SPARCP09486 303 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 XBP1P17861 261 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 BDNFP23560 247 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 RBMS1P29558 406 aaKnown RBP3.06□□□□□ -1.92
PTPN4-205ENST00000433888 BSGP35613 385 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 PSMC4P43686 418 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 LIMK2P53671 638 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 GEMIN4P57678 1058 aaKnown RBP3.06□□□□□ -1.92
PTPN4-205ENST00000433888 HLA-BQ31612 363 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 RARS2Q5T160 578 aaKnown RBP3.06□□□□□ -1.92
PTPN4-205ENST00000433888 GCNT6Q5T4J0 391 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 CCDC70Q6NSX1 233 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 CLEC4GQ6UXB4 293 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 MMS22LQ6ZRQ5 1243 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 GALNT5Q7Z7M9 940 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 OR2L2Q8NH16 312 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 SLCO2A1Q92959 643 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 AZIN2Q96A70 460 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 ABHD6Q9BV23 337 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 UPF3AQ9H1J1 476 aaKnown RBP3.06□□□□□ -1.92
PTPN4-205ENST00000433888 ZHX3Q9H4I2 956 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 SMC4Q9NTJ3 1288 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 FBXL17Q9UF56 701 aa3.06□□□□□ -1.92
PTPN4-205ENST00000433888 LRRFIP2Q9Y608 721 aaKnown RBP3.06□□□□□ -1.92
PTPN4-205ENST00000433888 SPIN1Q9Y657 262 aaPredicted RBP3.06□□□□□ -1.92
PTPN4-205ENST00000433888 ARID2Q68CP9 1835 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 A0A1W2PRB8 838 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 RTL8CO15255 209 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 BCL2L11O43521 198 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 PRG2P13727 222 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 CA4P22748 312 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 PIK3CAP42336 1068 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 MS4A2Q01362 244 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 PNRC1Q12796 327 aaPredicted RBP3.05□□□□□ -1.92
PTPN4-205ENST00000433888 PCGF3Q3KNV8 242 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 GRTP1Q5TC63 336 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 JAKMIP3Q5VZ66 844 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 CFAP77Q6ZQR2 320 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 MAATS1Q7Z4T9 603 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 R3HCC1LQ7Z5L2 792 aaKnown RBP3.05□□□□□ -1.92
PTPN4-205ENST00000433888 HOGA1Q86XE5 327 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 RAB42Q8N4Z0 105 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 RASL10AQ92737 203 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 DACH2Q96NX9 599 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 OR2A14Q96R47 310 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 HGH1Q9BTY7 390 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 TRAF4Q9BUZ4 470 aaPredicted RBP3.05□□□□□ -1.92
PTPN4-205ENST00000433888 ARRDC1-AS1Q9H2J1 176 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 SDR39U1Q9NRG7 319 aaPredicted RBP3.05□□□□□ -1.92
PTPN4-205ENST00000433888 SETD4Q9NVD3 440 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 NUDT4Q9NZJ9 180 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 WDR37Q9Y2I8 494 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 KCNE2Q9Y6J6 123 aa3.05□□□□□ -1.92
PTPN4-205ENST00000433888 IGLV3-10A0A075B6K4 115 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 A0A1W2PPH5 198 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 MED19A0JLT2 244 aaPredicted RBP3.04□□□□□ -1.92
PTPN4-205ENST00000433888 ELOVL7A1L3X0 281 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 NXPH2O95156 264 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 HUNKP57058 714 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 PRKCZQ05513 592 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 CALCOCO2Q13137 446 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 LY6DQ14210 128 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 EIF4A2Q14240 407 aaKnown RBP3.04□□□□□ -1.92
PTPN4-205ENST00000433888 KLHL26Q53HC5 615 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 ADALQ6DHV7 355 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 FIP1L1Q6UN15 594 aaKnown RBP3.04□□□□□ -1.92
PTPN4-205ENST00000433888 PTAR1Q7Z6K3 402 aaPredicted RBP3.04□□□□□ -1.92
PTPN4-205ENST00000433888 SLC39A11Q8N1S5 342 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 CENPTQ96BT3 561 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 NSL1Q96IY1 281 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 MPP4Q96JB8 637 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 NUDCD1Q96RS6 583 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 USP28Q96RU2 1077 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 FNBP1Q96RU3 617 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 CENPOQ9BU64 300 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 PREBQ9HCU5 417 aa3.04□□□□□ -1.92
PTPN4-205ENST00000433888 A4GALTQ9NPC4 353 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms