RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 CASP9P55211 416 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 NIPAL1Q6NVV3 410 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 NPNTQ6UXI9 565 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 OR10H4Q8NGA5 316 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 ART5Q96L15 291 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 CREB5Q02930 508 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 ZNF155Q12901 538 aaPredicted RBP14.53□□□□□ -0.08
CCDC50-201ENST00000392455 CENPNQ96H22 339 aaPredicted RBP14.53□□□□□ -0.08
CCDC50-201ENST00000392455 SENP8Q96LD8 212 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 TREX2Q9BQ50 279 aaPredicted RBP14.53□□□□□ -0.08
CCDC50-201ENST00000392455 LPIN3Q9BQK8 851 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 LRTM1Q9HBL6 345 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 SGK2Q9HBY8 427 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 CD93Q9NPY3 652 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 PMF1-BGLAPU3KQ54 211 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 GRXCR2A6NFK2 248 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 CDK2P24941 298 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 FAM47BQ8NA70 645 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 PPP1R13LQ8WUF5 828 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 KCTD4Q8WVF5 259 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 OVCA2Q8WZ82 227 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 TBC1D10AQ9BXI6 508 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 FZD1Q9UP38 647 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 TBL1XO60907 577 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 CRADDP78560 199 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 ECT2LQ008S8 904 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 CSTF1Q05048 431 aaKnown RBP14.53□□□□□ -0.08
CCDC50-201ENST00000392455 VWA5B1Q5TIE3 1220 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 EGFLAMQ63HQ2 1017 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 KIAA1324Q6UXG2 1013 aaKnown RBP14.53□□□□□ -0.08
CCDC50-201ENST00000392455 SATL1Q86VE3 508 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 SLC7A6OSQ96CW6 309 aaPredicted RBP14.53□□□□□ -0.08
CCDC50-201ENST00000392455 GAD1Q99259 594 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 ULBP1Q9BZM6 244 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 SLC5A7Q9GZV3 580 aa14.53□□□□□ -0.08
CCDC50-201ENST00000392455 KAT8Q9H7Z6 458 aaKnown RBP14.53□□□□□ -0.08
CCDC50-201ENST00000392455 SHMT1P34896 483 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 POLR2JP52435 117 aaKnown RBP14.52□□□□□ -0.08
CCDC50-201ENST00000392455 CA9Q16790 459 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 WNT8BQ93098 351 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 AZIN2Q96A70 460 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 CORO1BQ9BR76 489 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 MIR1-1HGQ9H1L0 117 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 CEP170BQ9Y4F5 1589 aaPredicted RBP14.52□□□□□ -0.08
CCDC50-201ENST00000392455 SIGLEC16A6NMB1 481 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 EFCAB9A8MZ26 197 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 SCAMP3O14828 347 aaKnown RBP14.52□□□□□ -0.08
CCDC50-201ENST00000392455 PDPK1O15530 556 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 GKN3PP0CG01 181 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 NFKB2Q00653 900 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 DLG2Q15700 870 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 INTS6LQ5JSJ4 861 aaKnown RBP14.52□□□□□ -0.08
CCDC50-201ENST00000392455 SWT1Q5T5J6 900 aaKnown RBP14.52□□□□□ -0.08
CCDC50-201ENST00000392455 DEFB132Q7Z7B7 95 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 IQGAP1P46940 1657 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 H7C417 338 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 LATS1O95835 1130 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 MVKQ03426 396 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 EML3Q32P44 896 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 NKD1Q969G9 470 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 MSANTD3Q96H12 275 aa14.52□□□□□ -0.08
CCDC50-201ENST00000392455 OR6C6A6NF89 314 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 TSTD3H0UI37 97 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 CXCL11O14625 94 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 ERAL1O75616 437 aaKnown RBP14.52□□□□□ -0.09
CCDC50-201ENST00000392455 CLDN9O95484 217 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 IFNA5P01569 189 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 HK1P19367 917 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 TFEBP19484 476 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 P2RX7Q99572 595 aaKnown RBP14.52□□□□□ -0.09
CCDC50-201ENST00000392455 AARSD1Q9BTE6 412 aaKnown RBP14.52□□□□□ -0.09
CCDC50-201ENST00000392455 OR12D3Q9UGF7 316 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 NARSO43776 548 aaKnown RBP14.52□□□□□ -0.09
CCDC50-201ENST00000392455 CYP3A4P08684 503 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 GSTM2P28161 218 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 TLE2Q04725 743 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 SF1Q15637 639 aaKnown RBP14.52□□□□□ -0.09
CCDC50-201ENST00000392455 C16orf46Q6P387 395 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 NANSQ9NR45 359 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 IL17RBQ9NRM6 502 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 CIB4A0PJX0 185 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 VEGFAP15692 232 aaPredicted RBP14.52□□□□□ -0.09
CCDC50-201ENST00000392455 BLKP51451 505 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 PHC1P78364 1004 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 CXCL9Q07325 125 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 PCDH1Q08174 1060 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 NDNQ99608 321 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 COPS8Q99627 209 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 RNF208Q9H0X6 261 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 PDE10AQ9Y233 779 aa14.52□□□□□ -0.09
CCDC50-201ENST00000392455 WSCD1Q658N2 575 aa14.51□□□□□ -0.09
CCDC50-201ENST00000392455 NIPA1Q7RTP0 329 aa14.51□□□□□ -0.09
CCDC50-201ENST00000392455 GLIS2Q9BZE0 524 aaPredicted RBP14.51□□□□□ -0.09
CCDC50-201ENST00000392455 RNF121Q9H920 327 aa14.51□□□□□ -0.09
CCDC50-201ENST00000392455 ASF1AQ9Y294 204 aa14.51□□□□□ -0.09
CCDC50-201ENST00000392455 CENPBD1B2RD01 187 aa14.51□□□□□ -0.09
CCDC50-201ENST00000392455 CRHR2Q13324 411 aa14.51□□□□□ -0.09
CCDC50-201ENST00000392455 MTMR8Q96EF0 704 aa14.51□□□□□ -0.09
CCDC50-201ENST00000392455 H0Y858 1186 aa14.51□□□□□ -0.09
CCDC50-201ENST00000392455 KDELR1P24390 212 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms