RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ASB9Q96DX5 294 aa21.53■■□□□ 1.04
TPM4-201ENST00000300933 IPPKQ9H8X2 491 aa21.53■■□□□ 1.04
TPM4-201ENST00000300933 CLK4Q9HAZ1 481 aaKnown RBP21.53■■□□□ 1.04
TPM4-201ENST00000300933 IL23AQ9NPF7 189 aa21.53■■□□□ 1.04
TPM4-201ENST00000300933 TDP1Q9NUW8 608 aa21.53■■□□□ 1.04
TPM4-201ENST00000300933 PCDHB1Q9Y5F3 818 aa21.53■■□□□ 1.04
TPM4-201ENST00000300933 GPR45Q9Y5Y3 372 aa21.53■■□□□ 1.04
TPM4-201ENST00000300933 ANGPT2O15123 496 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 SOCS5O75159 536 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 MLYCDO95822 493 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 GNAO1P09471 354 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 MYOGP15173 224 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 TXNDC11Q6PKC3 985 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 Q6ZSR9 355 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 NXPE1Q8N323 547 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 MRPL43Q8N983 215 aaKnown RBP21.52■■□□□ 1.04
TPM4-201ENST00000300933 SCRN2Q96FV2 425 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 BRD9Q9H8M2 597 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 SDR39U1Q9NRG7 319 aaPredicted RBP21.52■■□□□ 1.04
TPM4-201ENST00000300933 FARSBQ9NSD9 589 aaKnown RBP21.52■■□□□ 1.04
TPM4-201ENST00000300933 TMEM221A6NGB7 291 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 TIPRLO75663 272 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 ACADVLP49748 655 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 B4GALNT1Q00973 533 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 GTF2H2Q13888 395 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 ZNF648Q5T619 568 aaPredicted RBP21.52■■□□□ 1.04
TPM4-201ENST00000300933 GTF2H2CQ6P1K8 395 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 GRASPQ7Z6J2 395 aaPredicted RBP21.52■■□□□ 1.04
TPM4-201ENST00000300933 SLCO4A1Q96BD0 722 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 INIPQ9NRY2 104 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 B4GALT6Q9UBX8 382 aa21.52■■□□□ 1.04
TPM4-201ENST00000300933 NME4O00746 187 aa21.52■■□□□ 1.03
TPM4-201ENST00000300933 SYNCRIPO60506 623 aaKnown RBP21.52■■□□□ 1.03
TPM4-201ENST00000300933 ZBTB49Q6ZSB9 765 aa21.52■■□□□ 1.03
TPM4-201ENST00000300933 ZBTB2Q8N680 514 aa21.52■■□□□ 1.03
TPM4-201ENST00000300933 TBCCD1Q9NVR7 557 aa21.52■■□□□ 1.03
TPM4-201ENST00000300933 NDUFAF1Q9Y375 327 aa21.52■■□□□ 1.03
TPM4-201ENST00000300933 INSL6Q9Y581 213 aa21.52■■□□□ 1.03
TPM4-201ENST00000300933 CEP290O15078 2479 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 ARHGEF15O94989 841 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 CHEK2O96017 543 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 PABPC1P11940 636 aaKnown RBP21.51■■□□□ 1.03
TPM4-201ENST00000300933 ESRRGP62508 458 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 HSPA14Q0VDF9 509 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 ILF2Q12905 390 aaKnown RBP21.51■■□□□ 1.03
TPM4-201ENST00000300933 ABRAXAS2Q15018 415 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 PAGE3Q5JUK9 113 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 C6orf136Q5SQH8 315 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 C6orf10Q5SRN2 563 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 SFRP1Q8N474 314 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 PBXIP1Q96AQ6 731 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 MTFMTQ96DP5 389 aaKnown RBP21.51■■□□□ 1.03
TPM4-201ENST00000300933 EMILIN2Q9BXX0 1053 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 TMEM181Q9P2C4 612 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 TTC34A8MYJ7 566 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 SOCS2O14508 198 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 IL12AP29459 219 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 HTRA4P83105 476 aaPredicted RBP21.51■■□□□ 1.03
TPM4-201ENST00000300933 RABL3Q5HYI8 236 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 GPRC6AQ5T6X5 926 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 HMBOX1Q6NT76 420 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 DHRS4L2Q6PKH6 230 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 TPRG1Q6ZUI0 275 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 IRF7Q92985 503 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 C1QTNF3Q9BXJ4 246 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 CD300AQ9UGN4 299 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 ZNHIT2Q9UHR6 403 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 ZNF232Q9UNY5 417 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 HS3ST2Q9Y278 367 aa21.51■■□□□ 1.03
TPM4-201ENST00000300933 TLL1O43897 1013 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 CREMQ03060 361 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 ARHGEF7Q14155 803 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 TIGD2Q4W5G0 525 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 CARD16Q5EG05 197 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 GRAMD4Q6IC98 578 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 NECAB2Q7Z6G3 386 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 ADAMTSL2Q86TH1 951 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 GPR180Q86V85 440 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 CLP1Q92989 425 aaKnown RBP21.5■■□□□ 1.03
TPM4-201ENST00000300933 THAP11Q96EK4 314 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 NUDT4Q9NZJ9 180 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 USP22Q9UPT9 525 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 DNAH14Q0VDD8 3507 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 ASPDHA6ND91 283 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 SAC3D1A6NKF1 404 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 FXYD1O00168 92 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 EFCAB14O75071 495 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 ATE1O95260 518 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 S100BP04271 92 aaPredicted RBP21.5■■□□□ 1.03
TPM4-201ENST00000300933 RHDQ02161 417 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 C1QTNF12Q5T7M4 302 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 BLOC1S3Q6QNY0 202 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 XKR5Q6UX68 686 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 SERPINA13PQ6UXR4 307 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 ADIPOR2Q86V24 386 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 TMEM74Q96NL1 305 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 SLC25A13Q9UJS0 675 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 SARDHQ9UL12 918 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 TMPRSS11EQ9UL52 423 aa21.5■■□□□ 1.03
TPM4-201ENST00000300933 TRBV5-4A0A0C4DH59 114 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms