RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 RMDN2Q96LZ7 410 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 C12orf66Q96MD2 445 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 TEFMQ96QE5 360 aaKnown RBP12.77□□□□□ -0.37
SHMT2-211ENST00000554310 TAAR9Q96RI9 348 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 TTC1Q99614 292 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 ASPSCR1Q9BZE9 553 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 RAB33BQ9H082 229 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 PRORYQ9H606 182 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 VIPAS39Q9H9C1 493 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 COG4Q9H9E3 785 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 BFARQ9NZS9 450 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 FAM8A1Q9UBU6 413 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 SLC2A6Q9UGQ3 507 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 KLHL3Q9UH77 587 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 DMGDHQ9UI17 866 aaKnown RBP12.77□□□□□ -0.37
SHMT2-211ENST00000554310 SSUH2Q9Y2M2 353 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 HEBP2Q9Y5Z4 205 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 SDK2Q58EX2 2172 aa12.77□□□□□ -0.37
SHMT2-211ENST00000554310 OR51F1A6NGY5 319 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 EFCAB7A8K855 629 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 F8W8V4 182 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 CAPN5O15484 640 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-211ENST00000554310 GOT2P00505 430 aaKnown RBP12.76□□□□□ -0.37
SHMT2-211ENST00000554310 FTH1P02794 183 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 NDUFS1P28331 727 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 PPARGP37231 505 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-211ENST00000554310 MAGEA6P43360 314 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 NPY2RP49146 381 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 SESN2P58004 480 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-211ENST00000554310 CBX1P83916 185 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 CASP8Q14790 479 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 ZNF658BQ4V348 819 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-211ENST00000554310 ARMC3Q5W041 872 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 TTC27Q6P3X3 843 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 ZNF449Q6P9G9 518 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 PRSS42Q7Z5A4 293 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 IFT20Q8IY31 132 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 CFAP206Q8IYR0 622 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 CLDN19Q8N6F1 224 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 BMPERQ8N8U9 685 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 EIF1ADQ8N9N8 165 aaKnown RBP12.76□□□□□ -0.37
SHMT2-211ENST00000554310 OR4L1Q8NH43 312 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 AENQ8WTP8 325 aaKnown RBP12.76□□□□□ -0.37
SHMT2-211ENST00000554310 ART4Q93070 314 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 HDAC10Q969S8 669 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 MAGOHBQ96A72 148 aaKnown RBP12.76□□□□□ -0.37
SHMT2-211ENST00000554310 ZDHHC12Q96GR4 267 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 CRELD1Q96HD1 420 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 FCRL3Q96P31 734 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-211ENST00000554310 INSM2Q96T92 566 aaPredicted RBP12.76□□□□□ -0.37
SHMT2-211ENST00000554310 KRT12Q99456 494 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 AP1M1Q9BXS5 423 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 ACBD3Q9H3P7 528 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 KIR3DX1Q9H7L2 352 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 MRM3Q9HC36 420 aaKnown RBP12.76□□□□□ -0.37
SHMT2-211ENST00000554310 EPHA6Q9UF33 1036 aa12.76□□□□□ -0.37
SHMT2-211ENST00000554310 A8MU76 341 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 BHMG1C9JSJ3 638 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 STMND1H3BQB6 276 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 IFRD1O00458 451 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 PHF2O75151 1096 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 KRT14P02533 472 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 POLBP06746 335 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 COILP38432 576 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 LEPRP48357 1165 aaKnown RBP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 FNTAP49354 379 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 CXADRP78310 365 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 SARNPP82979 210 aaKnown RBP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 GPS1Q13098 491 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 GPS2Q13227 327 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 KCNJ11Q14654 390 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 FASTKD1Q53R41 847 aaKnown RBP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 DCAF12Q5T6F0 453 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 CAPRIN2Q6IMN6 1127 aaKnown RBP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 DUS1LQ6P1R4 473 aaKnown RBP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 LRRC8BQ6P9F7 803 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 CCDC137Q6PK04 289 aaKnown RBP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 MICALCLQ6ZW33 695 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 ZNF534Q76KX8 674 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 GPR155Q7Z3F1 870 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 MPP5Q8N3R9 675 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 LILRA3Q8N6C8 439 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 SPDYE1Q8NFV5 336 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 OR6P1Q8NGX9 317 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 GRK7Q8WTQ7 553 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 PMEPA1Q969W9 287 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 ZNF778Q96MU6 729 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 TGM7Q96PF1 710 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 ZPBPQ9BS86 351 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 OR52A5Q9H2C5 316 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 ZNF768Q9H5H4 540 aaKnown RBP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 TREX1Q9NSU2 369 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 OCIAD1Q9NX40 245 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 SIDT1Q9NXL6 827 aaKnown RBP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 SLC39A1Q9NY26 324 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 SLC24A2Q9UI40 661 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 PCDHB11Q9Y5F2 797 aa12.75□□□□□ -0.37
SHMT2-211ENST00000554310 CFAP20Q9Y6A4 193 aaKnown RBP12.75□□□□□ -0.37
SHMT2-211ENST00000554310 COLEC10Q9Y6Z7 277 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms