RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 UNKLQ9H9P5 680 aaKnown RBP6.11□□□□□ -1.43
LMO3-225ENST00000541295 GLOD4Q9HC38 313 aa6.11□□□□□ -1.43
LMO3-225ENST00000541295 NIT2Q9NQR4 276 aa6.11□□□□□ -1.43
LMO3-225ENST00000541295 PPP4R1LQ9P1A2 415 aa6.11□□□□□ -1.43
LMO3-225ENST00000541295 KCND3Q9UK17 655 aa6.11□□□□□ -1.43
LMO3-225ENST00000541295 SORCS3Q9UPU3 1222 aa6.11□□□□□ -1.43
LMO3-225ENST00000541295 NCKAP1Q9Y2A7 1128 aa6.11□□□□□ -1.43
LMO3-225ENST00000541295 SIGLEC16A6NMB1 481 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 E9PI62 339 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 F8VP50 259 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 FZD9O00144 591 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 MEIS1O00470 390 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 ITGB1BP1O14713 200 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 MEIS2O14770 477 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 SLC22A2O15244 555 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 DEAF1O75398 565 aaPredicted RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 RPP40O75818 363 aaKnown RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 CNPP09543 421 aaKnown RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 CKMT1AP12532 417 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 CPN2P22792 545 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 MMP8P22894 467 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 MARK3P27448 753 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 SCAND1P57086 179 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 CD300CQ08708 224 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 SELPLGQ14242 412 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 MESDQ14696 234 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 USP41Q3LFD5 358 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 NADK2Q4G0N4 442 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 DDI2Q5TDH0 399 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 KCTD11Q693B1 232 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 JADE1Q6IE81 842 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 OGFOD2Q6N063 350 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 CDC73Q6P1J9 531 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 C6orf15Q6UXA7 325 aaPredicted RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 LACC1Q8IV20 430 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 ZFP28Q8NHY6 868 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 LRRC15Q8TF66 581 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 OR1E3Q8WZA6 343 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 USP7Q93009 1102 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 TCEAL4Q96EI5 215 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 PBKQ96KB5 322 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 ZNF641Q96N77 438 aaPredicted RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 SERPINB11Q96P15 392 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 ECSITQ9BQ95 431 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 MTG1Q9BT17 334 aaPredicted RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 RUSC1Q9BVN2 902 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 MROQ9BYG7 248 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 OSBPL8Q9BZF1 889 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 WWP1Q9H0M0 922 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 MTIF3Q9H2K0 278 aaKnown RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 EIF2B3Q9NR50 452 aaKnown RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 SMPD3Q9NY59 655 aaPredicted RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 NDUFAF4Q9P032 175 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 KLHL14Q9P2G3 628 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 ZNF225Q9UK10 706 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 PPT2Q9UMR5 302 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 MTO1Q9Y2Z2 717 aaKnown RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 MRPS2Q9Y399 296 aaKnown RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 POMT1Q9Y6A1 747 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 PSME4Q14997 1843 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 FER1L6Q2WGJ9 1857 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 TRIM49BA6NDI0 452 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 H7C2Y5 167 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 SEC14L5O43304 696 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 BEST1O76090 585 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 HOXA7P31268 230 aaPredicted RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 KPNA2P52292 529 aaKnown RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 GPS1Q13098 491 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 PUM1Q14671 1186 aaKnown RBP eCLIP6.1□□□□□ -1.43
LMO3-225ENST00000541295 PCBP1Q15365 356 aaKnown RBP eCLIP6.1□□□□□ -1.43
LMO3-225ENST00000541295 ZFP69Q49AA0 526 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 PAN3Q58A45 887 aaKnown RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 NT5DC1Q5TFE4 455 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 DCAF15Q66K64 600 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 LDHDQ86WU2 507 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 KLHL7Q8IXQ5 586 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 CYP2W1Q8TAV3 490 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 ROBO4Q8WZ75 1007 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 ZBED3Q96IU2 234 aaPredicted RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 TXNDC15Q96J42 360 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 TEPSINQ96N21 525 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 SPON2Q9BUD6 331 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 TRAF4Q9BUZ4 470 aaPredicted RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 CCDC134Q9H6E4 229 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 COQ10BQ9H8M1 238 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 RXFP1Q9HBX9 757 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 CHRAC1Q9NRG0 131 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 GDE1Q9NZC3 331 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 AAR2Q9Y312 384 aaKnown RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 USP15Q9Y4E8 981 aaPredicted RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 GREB1LQ9C091 1923 aaPredicted RBP6.1□□□□□ -1.43
LMO3-225ENST00000541295 KIF13BQ9NQT8 1826 aa6.1□□□□□ -1.43
LMO3-225ENST00000541295 MYH7BA7E2Y1 1941 aa6.09□□□□□ -1.43
LMO3-225ENST00000541295 POTECB2RU33 542 aa6.09□□□□□ -1.43
LMO3-225ENST00000541295 CA12O43570 354 aa6.09□□□□□ -1.43
LMO3-225ENST00000541295 TNFAIP8O95379 198 aa6.09□□□□□ -1.43
LMO3-225ENST00000541295 PTBP3O95758 552 aaKnown RBP6.09□□□□□ -1.43
LMO3-225ENST00000541295 DLGAP3O95886 979 aa6.09□□□□□ -1.43
LMO3-225ENST00000541295 TGM6O95932 706 aa6.09□□□□□ -1.43
LMO3-225ENST00000541295 PNPP00491 289 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms