RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 USP1O94782 785 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 PAPSS2O95340 614 aaPredicted RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 ACSL3O95573 720 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 PENKP01210 267 aaPredicted RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 JCHAINP01591 159 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 KLKB1P03952 638 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 FGF1P05230 155 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 SERPINF2P08697 491 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 ZSCAN5DPP0CG00 497 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 ALADP13716 330 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 EPCAMP16422 314 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 POU3F3P20264 500 aaPredicted RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 POU3F2P20265 443 aaPredicted RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 DNAJB1P25685 340 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 LSP1P33241 339 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 CRHR1P34998 444 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 NNMTP40261 264 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 EIF2DP41214 584 aaKnown RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 NRIP1P48552 1158 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 CSNK1DP48730 415 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 POLD2P49005 469 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 SERPINB9P50453 376 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 PLK1P53350 603 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 SLC18A1P54219 525 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 PHC1P78364 1004 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 RAD51Q06609 339 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 ZNF844Q08AG5 666 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 PDIA2Q13087 525 aaKnown RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 KCNC3Q14003 757 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 CAMK1Q14012 370 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 TEAD2Q15562 447 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 ZNF77Q15935 545 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 C21orf62-AS1Q17RA5 79 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 KRT71Q3SY84 523 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 FAM153CQ494X1 144 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 ALFQ53S48 1182 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 SPANXN3Q5MJ09 141 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 ATAT1Q5SQI0 421 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 CEP85LQ5SZL2 805 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 EMC10Q5UCC4 262 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 RNF219Q5W0B1 726 aaPredicted RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 ZDHHC20Q5W0Z9 365 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 STEAP4Q687X5 459 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 KCTD11Q693B1 232 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 NADSYN1Q6IA69 706 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 MTSS1LQ765P7 747 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 C14orf80Q86SX3 495 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 LCA5Q86VQ0 697 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 MFN1Q8IWA4 741 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 AHI1Q8N157 1196 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 DNAAF3Q8N9W5 541 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 PPHLN1Q8NEY8 458 aaKnown RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 FIBINQ8TAL6 211 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 FAM76AQ8TAV0 307 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 GSDMBQ8TAX9 411 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 DDI1Q8WTU0 396 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 DEPDC1BQ8WUY9 529 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 ZNF480Q8WV37 535 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 OSCP1Q8WVF1 389 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 SMARCD2Q92925 531 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 IGSF8Q969P0 613 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 TTC17Q96AE7 1141 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 NACC2Q96BF6 587 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 ZNF707Q96C28 371 aaPredicted RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 FAM122AQ96E09 287 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 IMP4Q96G21 291 aaKnown RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 MSANTD3Q96H12 275 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 BOD1Q96IK1 185 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 CELF6Q96J87 481 aaKnown RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 LRIG1Q96JA1 1093 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 ATP6V1G3Q96LB4 118 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 PRICKLE1Q96MT3 831 aaPredicted RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 AGAP3Q96P47 875 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 ZIM3Q96PE6 472 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 XPO6Q96QU8 1125 aaKnown RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 RANBP9Q96S59 729 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 EBNA1BP2Q99848 306 aaKnown RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 TBL1YQ9BQ87 522 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 C1QTNF1Q9BXJ1 281 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 SLC39A8Q9C0K1 460 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 REXO4Q9GZR2 422 aaKnown RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 TTYH1Q9H313 450 aaPredicted RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 CDC42EP4Q9H3Q1 356 aaKnown RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 TRABDQ9H4I3 376 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 VPS37BQ9H9H4 285 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 PDFQ9HBH1 243 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 ARNT2Q9HBZ2 717 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 RBM22Q9NW64 420 aaKnown RBP eCLIP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 NINJ2Q9NZG7 142 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 MPP6Q9NZW5 540 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 HACD3Q9P035 362 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 TXNDC16Q9P2K2 825 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 PSMC3IPQ9P2W1 217 aaPredicted RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 DNMT3BQ9UBC3 853 aaKnown RBP4.3□□□□□ -1.72
SPTA1-206ENST00000484520 LGALS13Q9UHV8 139 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 SLC25A13Q9UJS0 675 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 ZNF180Q9UJW8 692 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 VPS28Q9UK41 221 aa4.3□□□□□ -1.72
SPTA1-206ENST00000484520 CDH7Q9ULB5 785 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms