RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 Q6ZSR9 355 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 RAB44Q7Z6P3 723 aaPredicted RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 ZFAND4Q86XD8 727 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 GPR65Q8IYL9 337 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 CHPFQ8IZ52 775 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 FBXL6Q8N531 539 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 DHRSXQ8N5I4 330 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 MEIOBQ8N635 442 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 PTGR2Q8N8N7 351 aaPredicted RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 OR10T2Q8NGX3 314 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 BRSK1Q8TDC3 778 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 EDEM1Q92611 657 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 POP5Q969H6 163 aaKnown RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 ZNF566Q969W8 418 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 VMP1Q96GC9 406 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 SUSD3Q96L08 255 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 C8orf48Q96LL4 319 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 TEX37Q96LM6 180 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 PPP1R36Q96LQ0 422 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 UROC1Q96N76 676 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 ZNF641Q96N77 438 aaPredicted RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 SERPINB11Q96P15 392 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 KLHL5Q96PQ7 755 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 TMEM209Q96SK2 561 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 FEM1AQ9BSK4 669 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 MED10Q9BTT4 135 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 NMUR1Q9HB89 426 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 SYTL2Q9HCH5 934 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 SMPD3Q9NY59 655 aaPredicted RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 SFMBT1Q9UHJ3 866 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 PCTPQ9UKL6 214 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 G3BP2Q9UN86 482 aaKnown RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 CDC14AQ9UNH5 594 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 FADS3Q9Y5Q0 445 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 DOCK4Q8N1I0 1966 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 SYNJ2BP-COX16A0A087WUM0 186 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 FAM234BA2RU67 622 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 M0QX08 132 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 SLC16A6O15403 523 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 TEX28O15482 410 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 CLOCKO15516 846 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 B4GALT3O60512 393 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PRAMEF11O60813 436 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PMPCBO75439 489 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 RPP40O75818 363 aaKnown RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 OAZ2O95190 189 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 ESRRBO95718 433 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 F11P03951 625 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 CYBBP04839 570 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 ZDHHC11BP0C7U3 371 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 UROSP10746 265 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 SLC2A3P11169 496 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 ODC1P11926 461 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PORP16435 677 aaPredicted RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 BDNFP23560 247 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PSMA4P25789 261 aaKnown RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 GSTM2P28161 218 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 MAGEA11P43364 429 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 RPS9P46781 194 aaKnown RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 RNF144AP50876 292 aaPredicted RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 GALK1P51570 392 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 ZNF140P52738 457 aaPredicted RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 STC1P52823 247 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 STX1BP61266 288 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 ESRRGP62508 458 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 ERVK-8P63133 956 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PRR20EP86478 221 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PRR20CP86479 221 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PRR20DP86480 221 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PRR20BP86481 221 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PRR20AP86496 221 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PPP2R2BQ00005 443 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 GSTM4Q03013 218 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 CLCQ05315 142 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 LIPEQ05469 1076 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 RING1Q06587 406 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 SLC10A7Q0GE19 358 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 SFSWAPQ12872 951 aaKnown RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 NFATC3Q12968 1075 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 MTA1Q13330 715 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 TUSC3Q13454 348 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 SERINC3Q13530 473 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PCBP2Q15366 365 aaKnown RBP eCLIP6.76□□□□□ -1.33
UBR4-212ENST00000475973 PARP15Q460N3 678 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 VPS26BQ4G0F5 336 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 PYCR3Q53H96 274 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 MS4A13Q5J8X5 152 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 RBM48Q5RL73 367 aaKnown RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 KRT80Q6KB66 452 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 NANOGP8Q6NSW7 305 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 TMEM214Q6NUQ4 689 aaKnown RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 METTL2BQ6P1Q9 378 aaKnown RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 TBPL2Q6SJ96 375 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 CYP2R1Q6VVX0 501 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 DCDC5Q6ZRR9 648 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 RPS27LQ71UM5 84 aaKnown RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 PTAR1Q7Z6K3 402 aaPredicted RBP6.76□□□□□ -1.33
UBR4-212ENST00000475973 GPR149Q86SP6 731 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 MON1AQ86VX9 555 aa6.76□□□□□ -1.33
UBR4-212ENST00000475973 SPPL2CQ8IUH8 684 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms