RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 RPS6KL1Q9Y6S9 549 aa14.8□□□□□ -0.04
VARS-223ENST00000474643 LOC101059948A0A1B0GTJ6 334 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 UBA6A0AVT1 1052 aaPredicted RBP14.79□□□□□ -0.04
VARS-223ENST00000474643 KLHL33A6NCF5 533 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 FANCGO15287 622 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 KATNA1O75449 491 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 SRP72O76094 671 aaKnown RBP14.79□□□□□ -0.04
VARS-223ENST00000474643 SUN1O94901 812 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 C9P02748 559 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 BRAFP15056 766 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 ITGALP20701 1170 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 DLSTP36957 453 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 FNTAP49354 379 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 ZNF140P52738 457 aaPredicted RBP14.79□□□□□ -0.04
VARS-223ENST00000474643 SARNPP82979 210 aaKnown RBP14.79□□□□□ -0.04
VARS-223ENST00000474643 NFKB2Q00653 900 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 NFE2L1Q14494 772 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 CLCA4Q14CN2 919 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 RPE65Q16518 533 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 KCTD19Q17RG1 926 aaPredicted RBP14.79□□□□□ -0.04
VARS-223ENST00000474643 CCDC38Q502W7 563 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 ZRANB3Q5FWF4 1079 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 ZNF449Q6P9G9 518 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 PPP1R3BQ86XI6 285 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 PPHLN1Q8NEY8 458 aaKnown RBP14.79□□□□□ -0.04
VARS-223ENST00000474643 DTX3LQ8TDB6 740 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 STYXQ8WUJ0 223 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 DNAJC1Q96KC8 554 aaKnown RBP14.79□□□□□ -0.04
VARS-223ENST00000474643 C12orf66Q96MD2 445 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 CLMPQ9H6B4 373 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 EIF2B3Q9NR50 452 aaKnown RBP14.79□□□□□ -0.04
VARS-223ENST00000474643 STARD5Q9NSY2 213 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 GEMIN8Q9NWZ8 242 aaKnown RBP14.79□□□□□ -0.04
VARS-223ENST00000474643 OGFRQ9NZT2 677 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 TMPRSS11EQ9UL52 423 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 ACSL5Q9ULC5 683 aa14.79□□□□□ -0.04
VARS-223ENST00000474643 TMEM184BQ9Y519 407 aaPredicted RBP14.79□□□□□ -0.04
VARS-223ENST00000474643 DNMT3AQ9Y6K1 912 aaPredicted RBP14.79□□□□□ -0.04
VARS-223ENST00000474643 HEATR9A2RTY3 570 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 AP3B1O00203 1094 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 CCL22O00626 93 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 MAP3K7O43318 606 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 LDB2O43679 373 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 KIAA0754O94854 1291 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 MC4RP32245 332 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 STAT5AP42229 794 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 GRIA1P42261 906 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 CTSCP53634 463 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 SESN2P58004 480 aaPredicted RBP14.78□□□□□ -0.04
VARS-223ENST00000474643 SH3BP2P78314 561 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 DMPKQ09013 629 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 CDC20Q12834 499 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 TUBB3Q13509 450 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 MAP7Q14244 749 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 CYP1B1Q16678 543 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 SKIDA1Q1XH10 827 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 DEFB109BQ30KR1 87 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 TAS2R42Q7RTR8 314 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 PRSS42Q7Z5A4 293 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 C11orf96Q7Z7L8 435 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 OOSP2Q86WS3 158 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 CREG2Q8IUH2 290 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 GALNT6Q8NCL4 622 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 UBXN4Q92575 508 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 ULK4Q96C45 1275 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 WWP1Q9H0M0 922 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 VPS37BQ9H9H4 285 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 CASS4Q9NQ75 786 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 SMOXQ9NWM0 555 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 SOHLH2Q9NX45 425 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 RARRES3Q9UL19 164 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 WDR37Q9Y2I8 494 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 CFAP20Q9Y6A4 193 aaKnown RBP14.78□□□□□ -0.04
VARS-223ENST00000474643 COLEC10Q9Y6Z7 277 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 BOD1L1Q8NFC6 3051 aa14.78□□□□□ -0.04
VARS-223ENST00000474643 NKX2-8O15522 239 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 KIF1CO43896 1103 aaKnown RBP14.77□□□□□ -0.05
VARS-223ENST00000474643 DLGAP3O95886 979 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 MT-ND3P03897 115 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 MTHFD1P11586 935 aaKnown RBP14.77□□□□□ -0.05
VARS-223ENST00000474643 ADRA1DP25100 572 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 ACY1Q03154 408 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 PRKAA1Q13131 559 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 MSLNQ13421 630 aaPredicted RBP14.77□□□□□ -0.05
VARS-223ENST00000474643 TIPARPQ7Z3E1 657 aaKnown RBP14.77□□□□□ -0.05
VARS-223ENST00000474643 ZNF572Q7Z3I7 529 aaPredicted RBP14.77□□□□□ -0.05
VARS-223ENST00000474643 SNX20Q7Z614 316 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 PTRH1Q86Y79 214 aaKnown RBP14.77□□□□□ -0.05
VARS-223ENST00000474643 KLHL7Q8IXQ5 586 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 GPR150Q8NGU9 434 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 C9orf43Q8TAL5 461 aaPredicted RBP14.77□□□□□ -0.05
VARS-223ENST00000474643 APOBEC4Q8WW27 367 aaKnown RBP14.77□□□□□ -0.05
VARS-223ENST00000474643 COPS8Q99627 209 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 DDX47Q9H0S4 455 aaKnown RBP14.77□□□□□ -0.05
VARS-223ENST00000474643 FAM96AQ9H5X1 160 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 FANCEQ9HB96 536 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 NLE1Q9NVX2 485 aaPredicted RBP14.77□□□□□ -0.05
VARS-223ENST00000474643 HRASLS2Q9NWW9 162 aa14.77□□□□□ -0.05
VARS-223ENST00000474643 SIDT1Q9NXL6 827 aaKnown RBP14.77□□□□□ -0.05
VARS-223ENST00000474643 BFARQ9NZS9 450 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms