RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 ZNF527Q8NB42 609 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 TWIST2Q8WVJ9 160 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 ART4Q93070 314 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 TLR10Q9BXR5 811 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 LHX5Q9H2C1 402 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 ADAM7Q9H2U9 754 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 ARHGEF4Q9NR80 690 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 HMGXB4Q9UGU5 601 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 CPQQ9Y646 472 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 TRPM3Q9HCF6 1732 aaPredicted RBP8.59□□□□□ -1.03
HPS4-209ENST00000466781 GRIN2DO15399 1336 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 ZBTB11O95625 1053 aaPredicted RBP8.59□□□□□ -1.03
HPS4-209ENST00000466781 SHBGP04278 402 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 ASLP04424 464 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 IGFBP5P24593 272 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 SLC7A1P30825 629 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 CLCNKBP51801 687 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 RPL19P84098 196 aaKnown RBP8.59□□□□□ -1.03
HPS4-209ENST00000466781 ZNF792Q3KQV3 632 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 TIGD2Q4W5G0 525 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 SLC29A4Q7RTT9 530 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 SYVN1Q86TM6 617 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 TBC1D21Q8IYX1 336 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 SAMD14Q8IZD0 417 aaPredicted RBP8.59□□□□□ -1.03
HPS4-209ENST00000466781 CPSF7Q8N684 471 aaKnown RBP8.59□□□□□ -1.03
HPS4-209ENST00000466781 HMGB4Q8WW32 186 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 KLK6Q92876 244 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 NKD1Q969G9 470 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 LRRC46Q96FV0 321 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 DGAT2Q96PD7 388 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 GPR21Q99679 349 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 RTKNQ9BST9 563 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 NOL11Q9H8H0 719 aaKnown RBP8.59□□□□□ -1.03
HPS4-209ENST00000466781 ANXA2P2A6NMY6 339 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 PEX12O00623 359 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 LYPLA1O75608 230 aaPredicted RBP8.59□□□□□ -1.03
HPS4-209ENST00000466781 AP2A2O94973 939 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 ANXA2P07355 339 aaKnown RBP8.59□□□□□ -1.03
HPS4-209ENST00000466781 ANPEPP15144 967 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 PGAM2P15259 253 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 FSHRP23945 695 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 RYKP34925 604 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 TIE1P35590 1138 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 PRKCIP41743 596 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 GALK1P51570 392 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 AP1S1P61966 158 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 BST1Q10588 318 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 SP140Q13342 867 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 LRRC32Q14392 662 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 ABCA11PQ4W5N1 156 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 ZNF311Q5JNZ3 666 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 AMIGO2Q86SJ2 522 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 EMID1Q96A84 441 aaPredicted RBP8.59□□□□□ -1.03
HPS4-209ENST00000466781 C11orf24Q96F05 449 aaPredicted RBP8.59□□□□□ -1.03
HPS4-209ENST00000466781 HSD17B14Q9BPX1 270 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 WBP11Q9Y2W2 641 aaKnown RBP8.59□□□□□ -1.03
HPS4-209ENST00000466781 KDM3BQ7LBC6 1761 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 SMIM28A0A1B0GU29 152 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 TTC34A8MYJ7 566 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 PDCD5O14737 125 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 EPHB6O15197 1021 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 MPZL2O60487 215 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 C8AP07357 584 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 DPYSQ14117 519 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 UAP1L1Q3KQV9 507 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 TMEM63BQ5T3F8 832 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 GPR107Q5VW38 600 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 ALYREFQ86V81 257 aaKnown RBP8.59□□□□□ -1.03
HPS4-209ENST00000466781 SERPINA9Q86WD7 417 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 CRYBG2Q8N1P7 616 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 MPP5Q8N3R9 675 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 KREMEN2Q8NCW0 462 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 BRSK1Q8TDC3 778 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 HMCESQ96FZ2 354 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 TMEM175Q9BSA9 504 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 EBPLQ9BY08 206 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 LRRC19Q9H756 370 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 ANKHQ9HCJ1 492 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 RCOR3Q9P2K3 495 aaPredicted RBP8.59□□□□□ -1.03
HPS4-209ENST00000466781 U3KQV3 271 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 SPEF2Q9C093 1822 aa8.59□□□□□ -1.03
HPS4-209ENST00000466781 PLK4O00444 970 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 PDPK1O15530 556 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 LCA5LO95447 670 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 ALPPP05187 535 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 ACVR2AP27037 513 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 CDH13P55290 713 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 TSPAN5P62079 268 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 DSC2Q02487 901 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 GNA12Q03113 381 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 HEPACAMQ14CZ8 416 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 TEX44Q53QW1 395 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 PLEKHG4Q58EX7 1191 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 ENPP7Q6UWV6 458 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 C1orf216Q8TAB5 229 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 DNAJC19Q96DA6 116 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 SNX27Q96L92 541 aa8.58□□□□□ -1.04
HPS4-209ENST00000466781 RBM4BQ9BQ04 359 aaKnown RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 RBM4Q9BWF3 364 aaKnown RBP8.58□□□□□ -1.04
HPS4-209ENST00000466781 PFDN2Q9UHV9 154 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms