RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 VEGFDO43915 354 aa8.79□□□□□ -1
VPS50-207ENST00000458530 RNASEH2AO75792 299 aaKnown RBP8.79□□□□□ -1
VPS50-207ENST00000458530 PCDH8O95206 1070 aa8.79□□□□□ -1
VPS50-207ENST00000458530 C8GP07360 202 aa8.79□□□□□ -1
VPS50-207ENST00000458530 ENO2P09104 434 aaPredicted RBP8.79□□□□□ -1
VPS50-207ENST00000458530 C1QTNF9P0C862 333 aa8.79□□□□□ -1
VPS50-207ENST00000458530 MPC1LP0DKB6 136 aa8.79□□□□□ -1
VPS50-207ENST00000458530 IMPDH1P20839 514 aa8.79□□□□□ -1
VPS50-207ENST00000458530 GMPRP36959 345 aa8.79□□□□□ -1
VPS50-207ENST00000458530 CXCL12P48061 93 aa8.79□□□□□ -1
VPS50-207ENST00000458530 NAGLUP54802 743 aa8.79□□□□□ -1
VPS50-207ENST00000458530 ALDH18A1P54886 795 aaKnown RBP8.79□□□□□ -1
VPS50-207ENST00000458530 HERVK_113P63132 956 aa8.79□□□□□ -1
VPS50-207ENST00000458530 RPS21P63220 83 aaKnown RBP8.79□□□□□ -1
VPS50-207ENST00000458530 PRR20EP86478 221 aa8.79□□□□□ -1
VPS50-207ENST00000458530 PRR20CP86479 221 aa8.79□□□□□ -1
VPS50-207ENST00000458530 PRR20DP86480 221 aa8.79□□□□□ -1
VPS50-207ENST00000458530 PRR20BP86481 221 aa8.79□□□□□ -1
VPS50-207ENST00000458530 PRR20AP86496 221 aa8.79□□□□□ -1
VPS50-207ENST00000458530 TIAL1Q01085 375 aaKnown RBP eCLIP8.79□□□□□ -1
VPS50-207ENST00000458530 PLOD1Q02809 727 aaPredicted RBP8.79□□□□□ -1
VPS50-207ENST00000458530 OVGP1Q12889 678 aa8.79□□□□□ -1
VPS50-207ENST00000458530 SP140Q13342 867 aa8.79□□□□□ -1
VPS50-207ENST00000458530 AGERQ15109 404 aa8.79□□□□□ -1
VPS50-207ENST00000458530 CDKL4Q5MAI5 379 aa8.79□□□□□ -1
VPS50-207ENST00000458530 SPDYAQ5MJ70 313 aa8.79□□□□□ -1
VPS50-207ENST00000458530 AGBL4Q5VU57 503 aa8.79□□□□□ -1
VPS50-207ENST00000458530 CGB2Q6NT52 195 aa8.79□□□□□ -1
VPS50-207ENST00000458530 METTL2BQ6P1Q9 378 aaKnown RBP8.79□□□□□ -1
VPS50-207ENST00000458530 NEK5Q6P3R8 708 aa8.79□□□□□ -1
VPS50-207ENST00000458530 TMEM207Q6UWW9 146 aa8.79□□□□□ -1
VPS50-207ENST00000458530 UNQ6494/PRO21346Q6UXR6 183 aa8.79□□□□□ -1
VPS50-207ENST00000458530 ADAMTSL4Q6UY14 1074 aa8.79□□□□□ -1
VPS50-207ENST00000458530 TRPM8Q7Z2W7 1104 aa8.79□□□□□ -1
VPS50-207ENST00000458530 EFL1Q7Z2Z2 1120 aaKnown RBP8.79□□□□□ -1
VPS50-207ENST00000458530 LONP2Q86WA8 852 aa8.79□□□□□ -1
VPS50-207ENST00000458530 GPSM1Q86YR5 675 aa8.79□□□□□ -1
VPS50-207ENST00000458530 CPNE9Q8IYJ1 553 aa8.79□□□□□ -1
VPS50-207ENST00000458530 SYNPOQ8N3V7 929 aa8.79□□□□□ -1
VPS50-207ENST00000458530 SPATA6LQ8N4H0 392 aa8.79□□□□□ -1
VPS50-207ENST00000458530 TMEM151AQ8N4L1 468 aa8.79□□□□□ -1
VPS50-207ENST00000458530 TXNDC5Q8NBS9 432 aaKnown RBP8.79□□□□□ -1
VPS50-207ENST00000458530 OR6Y1Q8NGX8 325 aa8.79□□□□□ -1
VPS50-207ENST00000458530 EEF1AKMT1Q8WVE0 214 aa8.79□□□□□ -1
VPS50-207ENST00000458530 C10orf82Q8WW14 230 aa8.79□□□□□ -1
VPS50-207ENST00000458530 ASZ1Q8WWH4 475 aa8.79□□□□□ -1
VPS50-207ENST00000458530 STON2Q8WXE9 905 aa8.79□□□□□ -1
VPS50-207ENST00000458530 EXT2Q93063 718 aa8.79□□□□□ -1
VPS50-207ENST00000458530 SCAMP4Q969E2 229 aa8.79□□□□□ -1
VPS50-207ENST00000458530 PTERQ96BW5 349 aa8.79□□□□□ -1
VPS50-207ENST00000458530 FAM136AQ96C01 138 aa8.79□□□□□ -1
VPS50-207ENST00000458530 SGF29Q96ES7 293 aa8.79□□□□□ -1
VPS50-207ENST00000458530 LOXL4Q96JB6 756 aa8.79□□□□□ -1
VPS50-207ENST00000458530 LRRC37BQ96QE4 947 aa8.79□□□□□ -1
VPS50-207ENST00000458530 ATOH8Q96SQ7 321 aa8.79□□□□□ -1
VPS50-207ENST00000458530 BOCQ9BWV1 1114 aa8.79□□□□□ -1
VPS50-207ENST00000458530 GATA5Q9BWX5 397 aaPredicted RBP8.79□□□□□ -1
VPS50-207ENST00000458530 ERVK-6Q9BXR3 956 aa8.79□□□□□ -1
VPS50-207ENST00000458530 KDM4CQ9H3R0 1056 aa8.79□□□□□ -1
VPS50-207ENST00000458530 LMAN1LQ9HAT1 526 aa8.79□□□□□ -1
VPS50-207ENST00000458530 FBRSL1Q9HCM7 1045 aaKnown RBP8.79□□□□□ -1
VPS50-207ENST00000458530 PREBQ9HCU5 417 aa8.79□□□□□ -1
VPS50-207ENST00000458530 PFDN4Q9NQP4 134 aa8.79□□□□□ -1
VPS50-207ENST00000458530 DNAJC28Q9NX36 388 aa8.79□□□□□ -1
VPS50-207ENST00000458530 FBXL12Q9NXK8 326 aa8.79□□□□□ -1
VPS50-207ENST00000458530 CD274Q9NZQ7 290 aa8.79□□□□□ -1
VPS50-207ENST00000458530 HCN2Q9UL51 889 aa8.79□□□□□ -1
VPS50-207ENST00000458530 ZMIZ1Q9ULJ6 1067 aa8.79□□□□□ -1
VPS50-207ENST00000458530 DNAJC16Q9Y2G8 782 aa8.79□□□□□ -1
VPS50-207ENST00000458530 MED16Q9Y2X0 877 aa8.79□□□□□ -1
VPS50-207ENST00000458530 DMXL2Q8TDJ6 3036 aa8.78□□□□□ -1
VPS50-207ENST00000458530 RALGAPA1Q6GYQ0 2036 aa8.78□□□□□ -1
VPS50-207ENST00000458530 GOLGA8QA0A0J9YX86 632 aa8.78□□□□□ -1
VPS50-207ENST00000458530 A0A1W2PP55 124 aa8.78□□□□□ -1
VPS50-207ENST00000458530 GOLGA8OA6NCC3 632 aa8.78□□□□□ -1
VPS50-207ENST00000458530 CCT8L1PA6NM43 557 aa8.78□□□□□ -1
VPS50-207ENST00000458530 TRPC5OSA6NMA1 111 aa8.78□□□□□ -1
VPS50-207ENST00000458530 FADS2P1A8MWK0 482 aa8.78□□□□□ -1
VPS50-207ENST00000458530 CHURC1-FNTBB4DL54 471 aa8.78□□□□□ -1
VPS50-207ENST00000458530 GPR89AB7ZAQ6 455 aa8.78□□□□□ -1
VPS50-207ENST00000458530 GOLGA8NF8WBI6 632 aa8.78□□□□□ -1
VPS50-207ENST00000458530 SLC16A5O15375 505 aa8.78□□□□□ -1
VPS50-207ENST00000458530 PLRG1O43660 514 aaKnown RBP8.78□□□□□ -1
VPS50-207ENST00000458530 NUAK1O60285 661 aa8.78□□□□□ -1
VPS50-207ENST00000458530 CCDC22O60826 627 aa8.78□□□□□ -1
VPS50-207ENST00000458530 MMP20O60882 483 aa8.78□□□□□ -1
VPS50-207ENST00000458530 KCNK5O95279 499 aa8.78□□□□□ -1
VPS50-207ENST00000458530 MLYCDO95822 493 aa8.78□□□□□ -1
VPS50-207ENST00000458530 TSPAN12O95859 305 aa8.78□□□□□ -1
VPS50-207ENST00000458530 SBK3P0C264 359 aa8.78□□□□□ -1
VPS50-207ENST00000458530 GPR89BP0CG08 455 aa8.78□□□□□ -1
VPS50-207ENST00000458530 VCLP18206 1134 aa8.78□□□□□ -1
VPS50-207ENST00000458530 CYP2A7P20853 494 aa8.78□□□□□ -1
VPS50-207ENST00000458530 AOAHP28039 575 aa8.78□□□□□ -1
VPS50-207ENST00000458530 DRD3P35462 400 aa8.78□□□□□ -1
VPS50-207ENST00000458530 RPIAP49247 311 aa8.78□□□□□ -1
VPS50-207ENST00000458530 FNTBP49356 437 aa8.78□□□□□ -1
VPS50-207ENST00000458530 PRLHRP49683 370 aa8.78□□□□□ -1
VPS50-207ENST00000458530 RPL14P50914 215 aaKnown RBP8.78□□□□□ -1
VPS50-207ENST00000458530 MMP16P51512 607 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms