RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 RNF180Q86T96 592 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 AKAP14Q86UN6 197 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 CILP2Q8IUL8 1156 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 TRPV3Q8NET8 790 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 SOCS4Q8WXH5 440 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 SH3YL1Q96HL8 342 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 FAR2Q96K12 515 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 NODALQ96S42 347 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 C1QTNF1Q9BXJ1 281 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 SMOC2Q9H3U7 446 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 MAGEE1Q9HCI5 957 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 MRPL40Q9NQ50 206 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 CCM2LQ9NUG4 571 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 KIF17Q9P2E2 1029 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 POLR3HQ9Y535 204 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 PFDN6O15212 129 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 FAM20BO75063 409 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 OR4F21O95013 312 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 ENO2P09104 434 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 ALPIP09923 528 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 BMP4P12644 408 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 SLC2A4P14672 509 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 RGRP47804 291 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 CLCN5P51795 746 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 CD47Q08722 323 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 RNF219Q5W0B1 726 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 UGT3A1Q6NUS8 523 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 TMEM207Q6UWW9 146 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 FAM151BQ6UXP7 276 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 TAS1R1Q7RTX1 841 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 THAP5Q7Z6K1 395 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 C2CD4AQ8NCU7 369 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 PCNPQ8WW12 178 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 ZHX1-C8orf76Q96EF9 292 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 SUSD3Q96L08 255 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 CRISPLD1Q9H336 500 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 IGSF5Q9NSI5 407 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 UBA2Q9UBT2 640 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 EIF2B4Q9UI10 523 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 FCF1Q9Y324 198 aaKnown RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 ORC6Q9Y5N6 252 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 LCTP09848 1927 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 HTTP42858 3142 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 TCRBV3S1A0A5B6 114 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 IDH3BO43837 385 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 NDUFS2O75306 463 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 POU2F1P14859 743 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 SDHBP21912 280 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 GDF5P43026 501 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 HMGCS1Q01581 520 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 PTGR1Q14914 329 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 OR4D1Q15615 310 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 XKR4Q5GH76 650 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 CLLU1OSQ5K130 101 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 KIAA0930Q6ICG6 404 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 FAM171BQ6P995 826 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 CLEC14AQ86T13 490 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 PGBD5Q8N414 524 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 SCAIQ8N9R8 606 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 ATG16L2Q8NAA4 619 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 OR13J1Q8NGT2 312 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 METTL6Q8TCB7 284 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 CEP19Q96LK0 163 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 CHCHD6Q9BRQ6 235 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 ATP13A3Q9H7F0 1226 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 TBC1D14Q9P2M4 693 aa9.79□□□□□ -0.84
CDC42SE1-202ENST00000439374 C2orf81A6NN90 581 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 NOTOA8MTQ0 251 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 TRIM24O15164 1050 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 ADAM12O43184 909 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 SEPT4O43236 478 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 PRKD3O94806 890 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 C8BP07358 591 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 MBL2P11226 248 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 RHOQP17081 205 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 GJA1P17302 382 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 LBPP18428 481 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 TACR2P21452 398 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 MYF6P23409 242 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 POU1F1P28069 291 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 MC4RP32245 332 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 ARSFP54793 590 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 PHC1P78364 1004 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 RAD51Q06609 339 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 DDX39BQ13838 428 aaKnown RBP9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 SEMA3AQ14563 771 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 SLC36A3Q495N2 470 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 STXBP5Q5T5C0 1151 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 ATAD3BQ5T9A4 648 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 SLC24A5Q71RS6 500 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 TMEM173Q86WV6 379 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 CELF2-AS1Q8N7Q2 184 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 OR52J3Q8NH60 311 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 LINGO1Q96FE5 620 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 TPD52L3Q96J77 140 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 FAM124BQ9H5Z6 455 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 TLR9Q9NR96 1032 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 TBCCD1Q9NVR7 557 aa9.78□□□□□ -0.84
CDC42SE1-202ENST00000439374 TAS2R13Q9NYV9 303 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms