RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 SPPL2CQ8IUH8 684 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 CHERPQ8IWX8 916 aaKnown RBP16.48■□□□□ 0.23
NUP50-202ENST00000396096 ADGRG5Q8IZF4 528 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 ADGRG2Q8IZP9 1017 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 PACRGLQ8N7B6 248 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 ZNF557Q8N988 423 aaPredicted RBP16.48■□□□□ 0.23
NUP50-202ENST00000396096 KLHL23Q8NBE8 558 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 DNAJB14Q8TBM8 379 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 APOL5Q9BWW9 433 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 EPB41L1Q9H4G0 881 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 CCL26Q9Y258 94 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 ANGPTL3Q9Y5C1 460 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 SLC28A1O00337 649 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 CCL16O15467 120 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 RGS14O43566 566 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 KATNA1O75449 491 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 TNFAIP8O95379 198 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 C1SP09871 688 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 PABPC4LP0CB38 370 aaKnown RBP16.48■□□□□ 0.23
NUP50-202ENST00000396096 G6PDP11413 515 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 IL10P22301 178 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 PSMA4P25789 261 aaKnown RBP16.48■□□□□ 0.23
NUP50-202ENST00000396096 HTR1EP28566 365 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 ATP13A5Q4VNC0 1218 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 RABL3Q5HYI8 236 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 TBCELQ5QJ74 424 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 NANOGP8Q6NSW7 305 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 DPY19L3Q6ZPD9 716 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 TRIM46Q7Z4K8 759 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 AMIGO2Q86SJ2 522 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 TMEM25Q86YD3 366 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 HID1Q8IV36 788 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 SLC22A17Q8WUG5 538 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 TSC22D3Q99576 134 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 KCTD14Q9BQ13 255 aaPredicted RBP16.48■□□□□ 0.23
NUP50-202ENST00000396096 EMILIN2Q9BXX0 1053 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 SLC29A3Q9BZD2 475 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 NANOGQ9H9S0 305 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 AGPAT4Q9NRZ5 378 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 ASIC5Q9NY37 505 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 EGFL7Q9UHF1 273 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 MYOFQ9NZM1 2061 aa16.48■□□□□ 0.23
NUP50-202ENST00000396096 TCRBV5S2A0A599 114 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 SOBPA7XYQ1 873 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 ARHGEF15O94989 841 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 FESP07332 822 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 FAM58BPP0C7Q3 252 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 UMPSP11172 480 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 PABPC1P11940 636 aaKnown RBP16.47■□□□□ 0.23
NUP50-202ENST00000396096 GGT5P36269 586 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 HTRA3P83110 453 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 MYBPC1Q00872 1141 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 MAD2L1Q13257 205 aaPredicted RBP16.47■□□□□ 0.23
NUP50-202ENST00000396096 KIAA0040Q15053 153 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 INTS11Q5TA45 600 aaKnown RBP16.47■□□□□ 0.23
NUP50-202ENST00000396096 DLEU7Q6UYE1 221 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 RTL10Q7L3V2 364 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 PAPD5Q8NDF8 572 aaKnown RBP16.47■□□□□ 0.23
NUP50-202ENST00000396096 CNBD2Q96M20 576 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 SLC29A1Q99808 456 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 C11orf49Q9H6J7 331 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 ZDHHC6Q9H6R6 413 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 BRD9Q9H8M2 597 aa16.47■□□□□ 0.23
NUP50-202ENST00000396096 KANSL1LA0AUZ9 987 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 AKAP10O43572 662 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 AHCYL1O43865 530 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 MOSPD3O75425 235 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 STK16O75716 305 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 OR56A5P0C7T3 313 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 EPB42P16452 691 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 AOAHP28039 575 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 SPINT3P49223 89 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 PRKCQQ04759 706 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 AASDHQ4L235 1098 aaPredicted RBP16.46■□□□□ 0.23
NUP50-202ENST00000396096 RFTN2Q52LD8 501 aaPredicted RBP16.46■□□□□ 0.23
NUP50-202ENST00000396096 TRPV3Q8NET8 790 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 USP7Q93009 1102 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 PPWD1Q96BP3 646 aaKnown RBP16.46■□□□□ 0.23
NUP50-202ENST00000396096 INTS7Q9NVH2 962 aaKnown RBP16.46■□□□□ 0.23
NUP50-202ENST00000396096 SMOXQ9NWM0 555 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 HCFC1R1Q9NWW0 138 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 NDUFA13Q9P0J0 144 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 SLAMF8Q9P0V8 285 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 B4GALT6Q9UBX8 382 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 ZMYM5Q9UJ78 669 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 PADI4Q9UM07 663 aa16.46■□□□□ 0.23
NUP50-202ENST00000396096 POLR3HQ9Y535 204 aaPredicted RBP16.46■□□□□ 0.23
NUP50-202ENST00000396096 NUAK1O60285 661 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 UGT2B4P06133 528 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 ANXA5P08758 320 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 FCGR1AP12314 374 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 VARSP26640 1264 aaKnown RBP16.46■□□□□ 0.22
NUP50-202ENST00000396096 CCR7P32248 378 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 GDF5P43026 501 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 POLR2LP62875 67 aaKnown RBP16.46■□□□□ 0.22
NUP50-202ENST00000396096 SEMG2Q02383 582 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 NRF1Q16656 503 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 SLC2A7Q6PXP3 512 aa16.46■□□□□ 0.22
NUP50-202ENST00000396096 KIAA0907Q7Z7F0 614 aaPredicted RBP16.46■□□□□ 0.22
NUP50-202ENST00000396096 PROSER1Q86XN7 944 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms