RNA–Protein interactions for RNA: ENST00000383820.9

RPUSD3-201, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD3, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-201ENST00000383820 RBM41Q96IZ5 413 aaKnown RBP17.4■□□□□ 0.38
RPUSD3-201ENST00000383820 RMDN2Q96LZ7 410 aa17.4■□□□□ 0.38
RPUSD3-201ENST00000383820 GBA3Q9H227 469 aa17.4■□□□□ 0.38
RPUSD3-201ENST00000383820 G3BP2Q9UN86 482 aaKnown RBP17.4■□□□□ 0.38
RPUSD3-201ENST00000383820 SNX7Q9UNH6 387 aa17.4■□□□□ 0.38
RPUSD3-201ENST00000383820 ARL5AQ9Y689 179 aa17.4■□□□□ 0.38
RPUSD3-201ENST00000383820 C17orf113A0A1B0GUU1 675 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 SGTAO43765 313 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 AGFG2O95081 481 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 POLR2CP19387 275 aaPredicted RBP17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 CDH3P22223 829 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 GNLYP22749 145 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 VARSP26640 1264 aaKnown RBP17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 RORAP35398 523 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 PRLHRP49683 370 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 PTPRCAPQ14761 206 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 LLGL1Q15334 1064 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 NADK2Q4G0N4 442 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 C4orf17Q53FE4 359 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 BBS12Q6ZW61 710 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 ENDOVQ8N8Q3 282 aaKnown RBP17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 OR4E2Q8NGC2 313 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 FERMT1Q9BQL6 677 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 FICDQ9BVA6 458 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 TLR10Q9BXR5 811 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 FKBPLQ9UIM3 349 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 TCFL5Q9UL49 500 aa17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 AAR2Q9Y312 384 aaKnown RBP17.39■□□□□ 0.37
RPUSD3-201ENST00000383820 SPTAN1Q13813 2472 aaKnown RBP17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 MED13Q9UHV7 2174 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 SLC9B1P1A6NJY1 282 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 CFAP99D6REC4 459 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 APOC4-APOC2K7ER74 178 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 MAP3K7O43318 606 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 DPM1O60762 260 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 TMEM63AO94886 807 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 CRTAMO95727 393 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 APOC2P02655 101 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 POLBP06746 335 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 ADRA1AP35348 466 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 ARCN1P48444 511 aaKnown RBP17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 VAV2P52735 878 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 XIAPP98170 497 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 ABRQ12979 859 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 MED25Q71SY5 747 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 LURAP1LQ8IV03 231 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 CNGA4Q8IV77 575 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 CCDC50Q8IVM0 306 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 CFAP206Q8IYR0 622 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 TMEM102Q8N9M5 508 aaPredicted RBP17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 LCN9Q8WX39 176 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 HAUS1Q96CS2 278 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 CLIP3Q96DZ5 547 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 PPM1MQ96MI6 270 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 DPH2Q9BQC3 489 aaPredicted RBP17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 PITPNM3Q9BZ71 974 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 SRMSQ9H3Y6 488 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 CUEDC1Q9NWM3 386 aaPredicted RBP17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 FAM8A1Q9UBU6 413 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 CRLS1Q9UJA2 301 aa17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.38■□□□□ 0.37
RPUSD3-201ENST00000383820 CAPN1P07384 714 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 CYP2A7P20853 494 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 RBL1P28749 1068 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 PRDX3P30048 256 aaKnown RBP17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 HADHAP40939 763 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 PREPP48147 710 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 RRADP55042 308 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 ZNF789Q5FWF6 425 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 LCN10Q6JVE6 187 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 FBXO38Q6PIJ6 1188 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 DAAM2Q86T65 1068 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 NXPE1Q8N323 547 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 LILRA3Q8N6C8 439 aaPredicted RBP17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 GLIS1Q8NBF1 620 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 SSC4DQ8WTU2 575 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 COPS8Q99627 209 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 GORASP1Q9BQQ3 440 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 TFB2MQ9H5Q4 396 aaKnown RBP17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 ACTR5Q9H9F9 607 aaPredicted RBP17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 PCMTD2Q9NV79 361 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 PLEKHB1Q9UF11 243 aaPredicted RBP17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 SERTAD3Q9UJW9 196 aa17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 SPTBN1Q01082 2364 aaKnown RBP17.37■□□□□ 0.37
RPUSD3-201ENST00000383820 SPENQ96T58 3664 aaKnown RBP17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 GSAPA4D1B5 854 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 TMEM150CB9EJG8 249 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 H7C0C1 242 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 IFRD1O00458 451 aaPredicted RBP17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 HBQ1P09105 142 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 ATP1B2P14415 290 aaPredicted RBP17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 ITGALP20701 1170 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 ATP5OP48047 213 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 CD151P48509 253 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 COPS2P61201 443 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 MSLNQ13421 630 aaPredicted RBP17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 PRPSAP1Q14558 356 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 INPP5JQ15735 1006 aaPredicted RBP17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 GPR33Q49SQ1 333 aa17.36■□□□□ 0.37
RPUSD3-201ENST00000383820 PRAMEF17Q5VTA0 474 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms