RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 VWA5B1Q5TIE3 1220 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 METTL2BQ6P1Q9 378 aaKnown RBP25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 CLNKQ7Z7G1 428 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 FAM124AQ86V42 546 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 ALYREFQ86V81 257 aaKnown RBP25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 TRPC4APQ8TEL6 797 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 KLK6Q92876 244 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 HIST1H2AHQ96KK5 128 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 NSUN5Q96P11 429 aaKnown RBP25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 HIST1H2AJQ99878 128 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 H2AFJQ9BTM1 129 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 PHPT1Q9NRX4 125 aaPredicted RBP25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 FAM8A1Q9UBU6 413 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 TRAF6Q9Y4K3 522 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 CHURC1-FNTBB4DL54 471 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 GPR89AB7ZAQ6 455 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 ANXA5P08758 320 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 GPR89BP0CG08 455 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 TSPAN8P19075 237 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 CYP2A7P20853 494 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 TPMTP51580 245 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 CCR3P51677 355 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 HABP4Q5JVS0 413 aaKnown RBP25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 MID1IP1Q9NPA3 183 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 WNT16Q9UBV4 365 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 PDE10AQ9Y233 779 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 TMEM98Q9Y2Y6 226 aa25.77■■□□□ 1.72
ATPAF1-202ENST00000371937 E2F3O00716 465 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 MATN4O95460 622 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 FGF4P08620 206 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 PBLDP30039 288 aaPredicted RBP25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 SH3BP2P78314 561 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 ZNF658BQ4V348 819 aaPredicted RBP25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 FBXO48Q5FWF7 155 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 Q6ZS52 159 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 SLC22A15Q8IZD6 547 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 CLYBLQ8N0X4 340 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 ZNF687Q8N1G0 1237 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 OR56A4Q8NGH8 313 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 MAPK15Q8TD08 544 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 MCOLN3Q8TDD5 553 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 HMGB4Q8WW32 186 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 RHBDF1Q96CC6 855 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 SHDQ96IW2 340 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 HGH1Q9BTY7 390 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 LMAN1LQ9HAT1 526 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 SEMA4BQ9NPR2 832 aaPredicted RBP25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 ARL15Q9NXU5 204 aa25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 EIF2B4Q9UI10 523 aaKnown RBP25.76■■□□□ 1.71
ATPAF1-202ENST00000371937 FCHO1O14526 889 aa25.75■■□□□ 1.71
ATPAF1-202ENST00000371937 CHUKO15111 745 aa25.75■■□□□ 1.71
ATPAF1-202ENST00000371937 SERPINA6P08185 405 aa25.75■■□□□ 1.71
ATPAF1-202ENST00000371937 TUBB3Q13509 450 aa25.75■■□□□ 1.71
ATPAF1-202ENST00000371937 SYT13Q7L8C5 426 aa25.75■■□□□ 1.71
ATPAF1-202ENST00000371937 ZNF547Q8IVP9 402 aa25.75■■□□□ 1.71
ATPAF1-202ENST00000371937 TCAIMQ8N3R3 496 aa25.75■■□□□ 1.71
ATPAF1-202ENST00000371937 FOPNLQ96NB1 174 aa25.75■■□□□ 1.71
ATPAF1-202ENST00000371937 LGR4Q9BXB1 951 aa25.75■■□□□ 1.71
ATPAF1-202ENST00000371937 NUF2Q9BZD4 464 aa25.75■■□□□ 1.71
ATPAF1-202ENST00000371937 BTBD1Q9H0C5 482 aa25.75■■□□□ 1.71
ATPAF1-202ENST00000371937 WWOXQ9NZC7 414 aa25.75■■□□□ 1.71
ATPAF1-202ENST00000371937 ANKRD12Q6UB98 2062 aa25.75■■□□□ 1.71
ATPAF1-202ENST00000371937 LRRC72A6NJI9 287 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 TMEM233B4DJY2 109 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 GIPC1O14908 333 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 POP7O75817 140 aaKnown RBP25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 AP1S2P56377 157 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 BNIP1Q12981 228 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 SLC9B1Q4ZJI4 515 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 METTL21CQ5VZV1 264 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 TTC23LQ6PF05 361 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 DOK6Q6PKX4 331 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 ACAD11Q709F0 780 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 CFAP206Q8IYR0 622 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 OR2T34Q8NGX1 318 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 OR2L2Q8NH16 312 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 UBTD2Q8WUN7 234 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 ESAMQ96AP7 390 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 NMUR2Q9GZQ4 415 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 SGK2Q9HBY8 427 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 TCF7L2Q9NQB0 619 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 ITM2CQ9NQX7 267 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 DNMT3AQ9Y6K1 912 aaPredicted RBP25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 MGAT4DA6NG13 374 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 MAT2AP31153 395 aaKnown RBP25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 PREPP48147 710 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 HNMTP50135 292 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 PDCD2Q16342 344 aaPredicted RBP25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 CRTC3Q6UUV7 619 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 TRIM69Q86WT6 500 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 RASGRP3Q8IV61 690 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 FLCNQ8NFG4 579 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 HM13Q8TCT9 377 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 AGAP11Q8TF27 550 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 CD244Q9BZW8 370 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 TNFRSF12AQ9NP84 129 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 GULP1Q9UBP9 304 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 FBXL21Q9UKT6 434 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 STK38LQ9Y2H1 464 aa25.74■■□□□ 1.71
ATPAF1-202ENST00000371937 OR1A2Q9Y585 309 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms