RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 DUSP4Q13115 394 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 MED21Q13503 144 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 MYBPC3Q14896 1274 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 FBXL22Q6P050 247 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 CYHR1Q6ZMK1 362 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 ISCA2Q86U28 154 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 CUZD1Q86UP6 607 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 GABPB2Q8TAK5 448 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 L3HYPDHQ96EM0 354 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 BTN2A3PQ96KV6 586 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 ARHGAP39Q9C0H5 1083 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 GSTO2Q9H4Y5 243 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 MRGBPQ9NV56 204 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 RIMS3Q9UJD0 308 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 PCDHB1Q9Y5F3 818 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 RHPN2P1A8MT19 583 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 STX16-NPEPL1H3BU86 382 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 UBFD1O14562 309 aaKnown RBP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 DENRO43583 198 aaKnown RBP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 NAT1P18440 290 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 ME2P23368 584 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 TM4SF4P48230 202 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 PKNOX1P55347 436 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 IL10RBQ08334 325 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 ART3Q13508 389 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 BTG3Q14201 252 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 FLOT2Q14254 428 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 RGMBQ6NW40 437 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 KLC3Q6P597 504 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 PTAR1Q7Z6K3 402 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 SAPCD2Q86UD0 394 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 SLC22A9Q8IVM8 553 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 ATP6V0D2Q8N8Y2 350 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 PCSK9Q8NBP7 692 aaKnown RBP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 PEX13Q92968 403 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 HDAC10Q969S8 669 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 C16orf92Q96LL3 132 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 NPAS2Q99743 824 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 GTSE1Q9NYZ3 720 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 MARCH4Q9P2E8 410 aaPredicted RBP7.25□□□□□ -1.25
CLCN3-202ENST00000360642 ATP23Q9Y6H3 246 aa7.25□□□□□ -1.25
CLCN3-202ENST00000360642 B9A039 149 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 FAM227AF5H4B4 570 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 AHCYL1O43865 530 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 EIF4EBP3O60516 100 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 SMIM24O75264 130 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 TBX18O95935 607 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 ENO3P13929 434 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 PPM1AP35813 382 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 FLT3LGP49771 235 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 EFEMP1Q12805 493 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 LRP8Q14114 963 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 ADGRE1Q14246 886 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 TIGD6Q17RP2 521 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 UGT2A3Q6UWM9 527 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 GLB1LQ6UWU2 654 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 SLC24A5Q71RS6 500 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 RPS27LQ71UM5 84 aaKnown RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 FAM20CQ8IXL6 584 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 GPR150Q8NGU9 434 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 LINC01599Q8WXQ3 324 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 DLG3Q92796 817 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 USP13Q92995 863 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 PABPC5Q96DU9 382 aaKnown RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 ITM2CQ9NQX7 267 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 POLR3BQ9NW08 1133 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 UXTQ9UBK9 157 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 BCAP29Q9UHQ4 241 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 KCTD3Q9Y597 815 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 PRSS51A0A1B0GVH4 220 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 ACOT7O00154 380 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 FBP2O00757 339 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 SYN3O14994 580 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 FDXRP22570 491 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 CCND3P30281 292 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 MSX2P35548 267 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 PBX3P40426 434 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 PEX19P40855 299 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 SUOXP51687 545 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 MRPS22P82650 360 aaKnown RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 TEKQ02763 1124 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 FOLH1Q04609 750 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 SQLEQ14534 574 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 MBTPS1Q14703 1052 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 PPP1R3AQ16821 1122 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 PARP15Q460N3 678 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 MMEL1Q495T6 779 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 ZNF678Q5SXM1 525 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 LCE2AQ5TA79 106 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 FAM45BPQ6NSW5 357 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 SDCCAG8Q86SQ7 713 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 LDB1Q86U70 411 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 LILRA2Q8N149 483 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 TTC9BQ8N6N2 239 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 ICA1LQ8NDH6 482 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 BHLHE22Q8NFJ8 381 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 FAM45AQ8TCE6 357 aa7.24□□□□□ -1.25
CLCN3-202ENST00000360642 ZNF483Q8TF39 744 aaPredicted RBP7.24□□□□□ -1.25
CLCN3-202ENST00000360642 TSC22D3Q99576 134 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms