RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 SEMA4BQ9NPR2 832 aaPredicted RBP16.04■□□□□ 0.16
TPM1-201ENST00000267996 ZNF225Q9UK10 706 aa16.04■□□□□ 0.16
TPM1-201ENST00000267996 GPR34Q9UPC5 381 aa16.04■□□□□ 0.16
TPM1-201ENST00000267996 GOLGA8QA0A0J9YX86 632 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 A0A1B0GTL3 188 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 C17orf113A0A1B0GUU1 675 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 GOLGA8OA6NCC3 632 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 GOLGA8NF8WBI6 632 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 ESRRBO95718 433 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 GUCA1CO95843 209 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 ZNF8P17098 575 aaPredicted RBP16.03■□□□□ 0.16
TPM1-201ENST00000267996 GGT5P36269 586 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 TRIM23P36406 574 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 ADPRHP54922 357 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 PKNOX1P55347 436 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 UBAP2LQ14157 1087 aaKnown RBP16.03■□□□□ 0.16
TPM1-201ENST00000267996 C18orf21Q32NC0 220 aaPredicted RBP16.03■□□□□ 0.16
TPM1-201ENST00000267996 TTC31Q49AM3 519 aaPredicted RBP16.03■□□□□ 0.16
TPM1-201ENST00000267996 CLEC6AQ6EIG7 209 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 XKR5Q6UX68 686 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 SYVN1Q86TM6 617 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 HEATR4Q86WZ0 1026 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 ZNF547Q8IVP9 402 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 TP53I13Q8NBR0 393 aaPredicted RBP16.03■□□□□ 0.16
TPM1-201ENST00000267996 RPLP0P6Q8NHW5 317 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 GANCQ8TET4 914 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 SIPA1Q96FS4 1042 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 MRGPRX1Q96LB2 322 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 LENG8Q96PV6 779 aaPredicted RBP16.03■□□□□ 0.16
TPM1-201ENST00000267996 TMEM79Q9BSE2 394 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 TEX101Q9BY14 249 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 CD244Q9BZW8 370 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 ZNF385DQ9H6B1 395 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 PREBQ9HCU5 417 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 MMP17Q9ULZ9 603 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 TRIM33Q9UPN9 1127 aa16.03■□□□□ 0.16
TPM1-201ENST00000267996 PRR5-ARHGAP8B1AHC4 643 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 LIN7AO14910 233 aaPredicted RBP16.02■□□□□ 0.16
TPM1-201ENST00000267996 CHUKO15111 745 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 PCCBP05166 539 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 ANXA5P08758 320 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 RPIAP49247 311 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 FOXA1P55317 472 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 ARHGAP8P85298 464 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 CDK3Q00526 305 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 GTF2H3Q13889 308 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 NEK5Q6P3R8 708 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 TMEM92Q6UXU6 159 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 GOLGA7Q7Z5G4 137 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 KBTBD6Q86V97 674 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 SLC22A15Q8IZD6 547 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 CPSF7Q8N684 471 aaKnown RBP16.02■□□□□ 0.16
TPM1-201ENST00000267996 OR14C36Q8NHC7 312 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 CEP70Q8NHQ1 597 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 ASB12Q8WXK4 309 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 TMEM159Q96B96 161 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 EGFL8Q99944 293 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 TRIM54Q9BYV2 358 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 LRMDAQ9H2I8 198 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 MBNL1Q9NR56 388 aaKnown RBP16.02■□□□□ 0.16
TPM1-201ENST00000267996 DNAJC15Q9Y5T4 150 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 ST14Q9Y5Y6 855 aa16.02■□□□□ 0.16
TPM1-201ENST00000267996 NUMA1Q14980 2115 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 A0A1W2PQU0 124 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 CFAP73A6NFT4 308 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 LOC730098B7Z3J9 87 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 E9PBE3 544 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 KLHL41O60662 606 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 RNGTTO60942 597 aaKnown RBP16.02■□□□□ 0.15
TPM1-201ENST00000267996 PSIP1O75475 530 aaKnown RBP16.02■□□□□ 0.15
TPM1-201ENST00000267996 SKAP2O75563 359 aaPredicted RBP16.02■□□□□ 0.15
TPM1-201ENST00000267996 CALB2P22676 271 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 PRDX3P30048 256 aaKnown RBP16.02■□□□□ 0.15
TPM1-201ENST00000267996 MAPK9P45984 424 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 HSPA7P48741 367 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 AP1S2P56377 157 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 CDC16Q13042 620 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 SYTL3Q4VX76 610 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 PTCRAQ6ISU1 281 aaPredicted RBP16.02■□□□□ 0.15
TPM1-201ENST00000267996 GPRIN3Q6ZVF9 776 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 C11orf96Q7Z7L8 435 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 HORMAD1Q86X24 394 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 TRAPPC5Q8IUR0 188 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 TCAIMQ8N3R3 496 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 LILRA3Q8N6C8 439 aaPredicted RBP16.02■□□□□ 0.15
TPM1-201ENST00000267996 KLHL29Q96CT2 875 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 PPP1R36Q96LQ0 422 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 NUSAP1Q9BXS6 441 aaKnown RBP16.02■□□□□ 0.15
TPM1-201ENST00000267996 ARHGEF3Q9NR81 526 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 WWOXQ9NZC7 414 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 STK38LQ9Y2H1 464 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 FIS1Q9Y3D6 152 aa16.02■□□□□ 0.15
TPM1-201ENST00000267996 DOCK9Q9BZ29 2069 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 K7EPI3 171 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 MYO1CO00159 1063 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 MAN2B1O00754 1011 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 OR7A17O14581 309 aa16.01■□□□□ 0.15
TPM1-201ENST00000267996 PAK4O96013 591 aaPredicted RBP16.01■□□□□ 0.15
TPM1-201ENST00000267996 NCF2P19878 526 aaPredicted RBP16.01■□□□□ 0.15
TPM1-201ENST00000267996 CYP2A7P20853 494 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms