RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 FSHRP23945 695 aa29.12■■■□□ 2.25
PABPN1-201ENST00000216727 GGT5P36269 586 aa29.12■■■□□ 2.25
PABPN1-201ENST00000216727 HSPA14Q0VDF9 509 aa29.12■■■□□ 2.25
PABPN1-201ENST00000216727 ZFP1Q6P2D0 407 aa29.12■■■□□ 2.25
PABPN1-201ENST00000216727 IL27RAQ6UWB1 636 aa29.12■■■□□ 2.25
PABPN1-201ENST00000216727 PARS2Q7L3T8 475 aaKnown RBP29.12■■■□□ 2.25
PABPN1-201ENST00000216727 ASB11Q8WXH4 323 aa29.12■■■□□ 2.25
PABPN1-201ENST00000216727 NXPE3Q969Y0 559 aa29.12■■■□□ 2.25
PABPN1-201ENST00000216727 ZNF184Q99676 751 aaPredicted RBP29.12■■■□□ 2.25
PABPN1-201ENST00000216727 HOPXQ9BPY8 73 aaPredicted RBP29.12■■■□□ 2.25
PABPN1-201ENST00000216727 GPATCH1Q9BRR8 931 aaKnown RBP29.12■■■□□ 2.25
PABPN1-201ENST00000216727 PARVBQ9HBI1 364 aa29.12■■■□□ 2.25
PABPN1-201ENST00000216727 OBP2AQ9NY56 170 aa29.12■■■□□ 2.25
PABPN1-201ENST00000216727 MAP10Q9P2G4 905 aa29.12■■■□□ 2.25
PABPN1-201ENST00000216727 DEC1Q9P2X7 70 aa29.12■■■□□ 2.25
PABPN1-201ENST00000216727 CD300AQ9UGN4 299 aa29.12■■■□□ 2.25
PABPN1-201ENST00000216727 PDE10AQ9Y233 779 aa29.12■■■□□ 2.25
PABPN1-201ENST00000216727 PSMD11O00231 422 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 ANGPT2O15123 496 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 STK16O75716 305 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 PRNPP04156 253 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 GDF5P43026 501 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 TRIM25Q14258 630 aaKnown RBP29.11■■■□□ 2.25
PABPN1-201ENST00000216727 EIF4HQ15056 248 aaKnown RBP29.11■■■□□ 2.25
PABPN1-201ENST00000216727 ZNF284Q2VY69 593 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 VPS26BQ4G0F5 336 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 RAVER1Q8IY67 606 aaKnown RBP29.11■■■□□ 2.25
PABPN1-201ENST00000216727 TCAIMQ8N3R3 496 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 VN1R2Q8NFZ6 395 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 ZFYVE19Q96K21 471 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 VPS35Q96QK1 796 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 FAM83CQ9BQN1 747 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 ZIM2Q9NZV7 527 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 YBX2Q9Y2T7 364 aaKnown RBP29.11■■■□□ 2.25
PABPN1-201ENST00000216727 ATG2AQ2TAZ0 1938 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 SLC16A5O15375 505 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 SGTAO43765 313 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 HMOX2P30519 316 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 MSX2P35548 267 aaPredicted RBP29.11■■■□□ 2.25
PABPN1-201ENST00000216727 SLC6A11P48066 632 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 HTR6P50406 440 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 MESP2Q0VG99 397 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 SP140Q13342 867 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 RCAN2Q14206 197 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 SAMD4BQ5PRF9 694 aaKnown RBP29.11■■■□□ 2.25
PABPN1-201ENST00000216727 LIPIQ6XZB0 460 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 NEK10Q6ZWH5 1172 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 UBE2R2Q712K3 238 aaPredicted RBP29.11■■■□□ 2.25
PABPN1-201ENST00000216727 SFRP1Q8N474 314 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 TRIM54Q9BYV2 358 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 TRPV4Q9HBA0 871 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 GDE1Q9NZC3 331 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 PSMD13Q9UNM6 376 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 C2orf16Q68DN1 1984 aa29.11■■■□□ 2.25
PABPN1-201ENST00000216727 FADS2P1A8MWK0 482 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 QSOX1O00391 747 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 KATNA1O75449 491 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 EBLN1P0CF75 366 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 EPB42P16452 691 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 PRMT9Q6P2P2 845 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 NRSN1Q8IZ57 195 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 BHLHE22Q8NFJ8 381 aaPredicted RBP29.1■■■□□ 2.25
PABPN1-201ENST00000216727 BTN2A2Q8WVV5 523 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 LMAN2LQ9H0V9 348 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 HEBP1Q9NRV9 189 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 ARL15Q9NXU5 204 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 TRPS1Q9UHF7 1281 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 OTOL1A6NHN0 477 aaPredicted RBP29.1■■■□□ 2.25
PABPN1-201ENST00000216727 HEPACAM2A8MVW5 462 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 SYNCRIPO60506 623 aaKnown RBP29.1■■■□□ 2.25
PABPN1-201ENST00000216727 MTX2O75431 263 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 FTH1P02794 183 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 ELFN1P0C7U0 828 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 EMX2Q04743 252 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 TRAP1Q12931 704 aaKnown RBP29.1■■■□□ 2.25
PABPN1-201ENST00000216727 SERPINA13PQ6UXR4 307 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 KBTBD2Q8IY47 623 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 FNDC5Q8NAU1 212 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 CERS4Q9HA82 394 aa29.1■■■□□ 2.25
PABPN1-201ENST00000216727 A0A1W2PP18 115 aa29.09■■■□□ 2.25
PABPN1-201ENST00000216727 SLC22A3O75751 556 aa29.09■■■□□ 2.25
PABPN1-201ENST00000216727 HNRNPA1L2Q32P51 320 aaKnown RBP29.09■■■□□ 2.25
PABPN1-201ENST00000216727 POM121L1PQ3SYA9 428 aa29.09■■■□□ 2.25
PABPN1-201ENST00000216727 LDLRAP1Q5SW96 308 aa29.09■■■□□ 2.25
PABPN1-201ENST00000216727 LAYNQ6UX15 382 aa29.09■■■□□ 2.25
PABPN1-201ENST00000216727 MBOAT1Q6ZNC8 495 aa29.09■■■□□ 2.25
PABPN1-201ENST00000216727 MINDY1Q8N5J2 469 aa29.09■■■□□ 2.25
PABPN1-201ENST00000216727 TMIEQ8NEW7 156 aa29.09■■■□□ 2.25
PABPN1-201ENST00000216727 SPDL1Q96EA4 605 aa29.09■■■□□ 2.25
PABPN1-201ENST00000216727 PRORSD1PA6NEY8 169 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 H0Y858 1186 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 GFYI3L273 518 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 KPNA3O00505 521 aaPredicted RBP29.08■■■□□ 2.25
PABPN1-201ENST00000216727 CASQ2O14958 399 aaPredicted RBP29.08■■■□□ 2.25
PABPN1-201ENST00000216727 LSM1O15116 133 aaKnown RBP29.08■■■□□ 2.25
PABPN1-201ENST00000216727 WDR47O94967 919 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 ZFP36L2P47974 494 aaKnown RBP29.08■■■□□ 2.25
PABPN1-201ENST00000216727 BOP1Q14137 746 aaKnown RBP29.08■■■□□ 2.25
PABPN1-201ENST00000216727 ABRAXAS2Q15018 415 aa29.08■■■□□ 2.25
PABPN1-201ENST00000216727 PDGFRLQ15198 375 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms