RNA–Protein interactions for RNA: ENST00000577646.5

RARA-208, Transcript of retinoic acid receptor alpha, humanhuman

TSL 5

Gene RARA, Length 733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-208ENST00000577646 ACADVLP49748 655 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 EPHA4P54764 986 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 FOXC1Q12948 553 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 CTBP1Q13363 440 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 BIRC2Q13490 618 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.13□□□□□ -0.47
RARA-208ENST00000577646 CAPRIN2Q6IMN6 1127 aaKnown RBP12.13□□□□□ -0.47
RARA-208ENST00000577646 LRRC8EQ6NSJ5 796 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 TRMT10CQ7L0Y3 403 aaKnown RBP12.13□□□□□ -0.47
RARA-208ENST00000577646 ELMO1Q92556 727 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 KCNJ9Q92806 393 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 TMEM159Q96B96 161 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 CAMK1GQ96NX5 476 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 RHOXF2Q9BQY4 288 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 WDR83Q9BRX9 315 aaKnown RBP12.13□□□□□ -0.47
RARA-208ENST00000577646 FUT8Q9BYC5 575 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 COG4Q9H9E3 785 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 PLAC1Q9HBJ0 212 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 LRRC4CQ9HCJ2 640 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 POT1Q9NUX5 634 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 DNAJC16Q9Y2G8 782 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 PCNX2A6NKB5 2137 aa12.13□□□□□ -0.47
RARA-208ENST00000577646 LY6G6EA0A0G2JKS1 128 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 SPAARA0A1B0GVQ0 90 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 SLC5A10A0PJK1 596 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 FAM159BA6NKW6 160 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 RHPN2P1A8MT19 583 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 B4DGG1 531 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 GOLGA8KD6RF30 607 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 E5RI56 91 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 GOLGA8TH3BQL2 631 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 SNX2O60749 519 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 GPC4O75487 556 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 RFPL3O75679 317 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 VIPP01282 170 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 AHSGP02765 367 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 RPN2P04844 631 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 CBSLP0DN79 551 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 AOAHP28039 575 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 FMO4P31512 558 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 CBSP35520 551 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 SLC1A2P43004 574 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 EIF3BP55884 814 aaKnown RBP12.12□□□□□ -0.47
RARA-208ENST00000577646 GPLD1P80108 840 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 SHC2P98077 582 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 NFE2L1Q14494 772 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 FASTKD3Q14CZ7 662 aaKnown RBP12.12□□□□□ -0.47
RARA-208ENST00000577646 ST3GAL2Q16842 350 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 TTLL9Q3SXZ7 439 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 SYTL3Q4VX76 610 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 HP1BP3Q5SSJ5 553 aaPredicted RBP12.12□□□□□ -0.47
RARA-208ENST00000577646 TEX35Q5T0J7 233 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 NEK10Q6ZWH5 1172 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 OTOAQ7RTW8 1153 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 LDB1Q86U70 411 aaPredicted RBP12.12□□□□□ -0.47
RARA-208ENST00000577646 DENND6AQ8IWF6 608 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 KYQ8NBH2 561 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 SLC37A2Q8TED4 501 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 UBXN4Q92575 508 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 CYTH2Q99418 400 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 TRIM56Q9BRZ2 755 aaKnown RBP12.12□□□□□ -0.47
RARA-208ENST00000577646 MVB12BQ9H7P6 319 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 PRDM8Q9NQV8 689 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 TXNDC16Q9P2K2 825 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 LRIT1Q9P2V4 623 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 CPNE7Q9UBL6 633 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 NFU1Q9UMS0 254 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 CRYL1Q9Y2S2 319 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 PRSS21Q9Y6M0 314 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 U3KQA8 63 aa12.12□□□□□ -0.47
RARA-208ENST00000577646 MAP1BP46821 2468 aaKnown RBP12.11□□□□□ -0.47
RARA-208ENST00000577646 TCRBV9S1A1TA0A576 114 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 CPED1A4D0V7 1026 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 LILRA5A6NI73 299 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 TMX2-CTNND1H3BSU7 103 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 VPS26AO75436 327 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 TCEA3O75764 348 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 HAUS5O94927 633 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 FTH1P19P0C7X4 201 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 ENO3P13929 434 aaPredicted RBP12.11□□□□□ -0.47
RARA-208ENST00000577646 CHRM3P20309 590 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 ECHS1P30084 290 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 SSTR1P30872 391 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 CCR7P32248 378 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 CSE1LP55060 971 aaKnown RBP12.11□□□□□ -0.47
RARA-208ENST00000577646 UBE2IP63279 158 aaKnown RBP12.11□□□□□ -0.47
RARA-208ENST00000577646 HHEXQ03014 270 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 RPE65Q16518 533 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 PLA2G4EQ3MJ16 856 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 WDR93Q6P2C0 686 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 TRMT10BQ6PF06 316 aaKnown RBP12.11□□□□□ -0.47
RARA-208ENST00000577646 KLHL35Q6PF15 583 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 EFL1Q7Z2Z2 1120 aaKnown RBP12.11□□□□□ -0.47
RARA-208ENST00000577646 TRIM48Q8IWZ4 208 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 SLC22A15Q8IZD6 547 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 GALNT15Q8N3T1 639 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 PHC3Q8NDX5 983 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 IFI44Q8TCB0 444 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 ADAMTS14Q8WXS8 1223 aa12.11□□□□□ -0.47
RARA-208ENST00000577646 INPP5DQ92835 1189 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms