RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 HACD3Q9P035 362 aa14.85□□□□□ -0.03
RAB40B-203ENST00000570676 AKAP7Q9P0M2 348 aaPredicted RBP14.85□□□□□ -0.03
RAB40B-203ENST00000570676 CPNE7Q9UBL6 633 aa14.85□□□□□ -0.03
RAB40B-203ENST00000570676 RAB21Q9UL25 225 aa14.85□□□□□ -0.03
RAB40B-203ENST00000570676 PCDHGA3Q9Y5H0 932 aa14.85□□□□□ -0.03
RAB40B-203ENST00000570676 BAHCC1Q9P281 2608 aa14.85□□□□□ -0.03
RAB40B-203ENST00000570676 FASNP49327 2511 aaKnown RBP14.84□□□□□ -0.03
RAB40B-203ENST00000570676 OR5K4A6NMS3 321 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 KMOO15229 486 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 BRAFP15056 766 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 MGAT1P26572 445 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 NPY2RP49146 381 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 BBS9Q3SYG4 887 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 MSS51Q4VC12 460 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 WDR74Q6RFH5 385 aaPredicted RBP14.84□□□□□ -0.03
RAB40B-203ENST00000570676 FAM151BQ6UXP7 276 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 CENPUQ71F23 418 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 ARHGAP22Q7Z5H3 698 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 VASH2Q86V25 355 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 AVL9Q8NBF6 648 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 SH3KBP1Q96B97 665 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 AHCYL2Q96HN2 611 aaKnown RBP14.84□□□□□ -0.03
RAB40B-203ENST00000570676 TBC1D10AQ9BXI6 508 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 UCK1Q9HA47 277 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 OCIAD1Q9NX40 245 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 BFARQ9NZS9 450 aa14.84□□□□□ -0.03
RAB40B-203ENST00000570676 ZNF624Q9P2J8 865 aaPredicted RBP14.84□□□□□ -0.03
RAB40B-203ENST00000570676 MN1Q10571 1320 aaPredicted RBP14.84□□□□□ -0.03
RAB40B-203ENST00000570676 GLYATL1P3A0A0U1RQE8 302 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 SDR42E2A6NKP2 422 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 BUD23O43709 281 aaKnown RBP14.83□□□□□ -0.04
RAB40B-203ENST00000570676 BANF1O75531 89 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 CDK14O94921 469 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 FAM153BP0C7A2 387 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 XRCC1P18887 633 aaPredicted RBP14.83□□□□□ -0.04
RAB40B-203ENST00000570676 WT1P19544 449 aaPredicted RBP14.83□□□□□ -0.04
RAB40B-203ENST00000570676 MAGEA3P43357 314 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 DHX9Q08211 1270 aaKnown RBP14.83□□□□□ -0.04
RAB40B-203ENST00000570676 PDIA2Q13087 525 aaKnown RBP14.83□□□□□ -0.04
RAB40B-203ENST00000570676 CHRNA6Q15825 494 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 SEPT7Q16181 437 aaKnown RBP14.83□□□□□ -0.04
RAB40B-203ENST00000570676 FAM153CQ494X1 144 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 TAF1BQ53T94 588 aaPredicted RBP14.83□□□□□ -0.04
RAB40B-203ENST00000570676 ZDHHC20Q5W0Z9 365 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 CEP128Q6ZU80 1094 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 DDHD1Q8NEL9 900 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.83□□□□□ -0.04
RAB40B-203ENST00000570676 TAAR9Q96RI9 348 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 DDA1Q9BW61 102 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.83□□□□□ -0.04
RAB40B-203ENST00000570676 SEMA4CQ9C0C4 833 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 TSPYL1Q9H0U9 437 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 SAYSD1Q9NPB0 183 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 SMOXQ9NWM0 555 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 SYBUQ9NX95 663 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 OGFRQ9NZT2 677 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 DNAJC16Q9Y2G8 782 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 B3GALT1Q9Y5Z6 326 aa14.83□□□□□ -0.04
RAB40B-203ENST00000570676 MGAQ8IWI9 3026 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 UQCRHLA0A096LP55 91 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 EFCAB7A8K855 629 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 PDZK1P1A8MUH7 402 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 B4E171 279 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 E7ESA3 106 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 EIF3HO15372 352 aaKnown RBP eCLIP14.82□□□□□ -0.04
RAB40B-203ENST00000570676 UQCRHP07919 91 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 CSTF2P33240 577 aaKnown RBP eCLIP14.82□□□□□ -0.04
RAB40B-203ENST00000570676 SLC19A1P41440 591 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 TSPAN7P41732 249 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 MAPK9P45984 424 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 CTSCP53634 463 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 CRADDP78560 199 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 TMEM115Q12893 351 aaPredicted RBP14.82□□□□□ -0.04
RAB40B-203ENST00000570676 MSLNQ13421 630 aaPredicted RBP14.82□□□□□ -0.04
RAB40B-203ENST00000570676 SEPT6Q14141 434 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 PTPRCAPQ14761 206 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 POU6F1Q14863 301 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 HP1BP3Q5SSJ5 553 aaPredicted RBP14.82□□□□□ -0.04
RAB40B-203ENST00000570676 TMEM164Q5U3C3 297 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 AGAP9Q5VTM2 703 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 CASC4Q6P4E1 433 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 ABRAXAS1Q6UWZ7 409 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 TMEM26Q6ZUK4 368 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 TRAPPC5Q8IUR0 188 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 MPP5Q8N3R9 675 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 ZNF843Q8N446 348 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 SIGLEC10Q96LC7 697 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 PHACTR1Q9C0D0 580 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 IL22Q9GZX6 179 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 EPB41L1Q9H4G0 881 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 POT1Q9NUX5 634 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 PCDHGA4Q9Y5G9 962 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 ARL5AQ9Y689 179 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 MAD1L1Q9Y6D9 718 aa14.82□□□□□ -0.04
RAB40B-203ENST00000570676 STMND1H3BQB6 276 aa14.81□□□□□ -0.04
RAB40B-203ENST00000570676 UGT1A9O60656 530 aa14.81□□□□□ -0.04
RAB40B-203ENST00000570676 C9P02748 559 aa14.81□□□□□ -0.04
RAB40B-203ENST00000570676 ANKRD34CP0C6C1 535 aa14.81□□□□□ -0.04
RAB40B-203ENST00000570676 UGT1A6P19224 532 aa14.81□□□□□ -0.04
RAB40B-203ENST00000570676 UGT1A1P22309 533 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms