RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 EFCAB7A8K855 629 aa24.62■■□□□ 1.53
FANCA-228ENST00000567943 B4E171 279 aa24.62■■□□□ 1.53
FANCA-228ENST00000567943 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.62■■□□□ 1.53
FANCA-228ENST00000567943 K7ENP7 123 aa24.62■■□□□ 1.53
FANCA-228ENST00000567943 TPSB2P20231 275 aa24.62■■□□□ 1.53
FANCA-228ENST00000567943 FOXN2P32314 431 aa24.62■■□□□ 1.53
FANCA-228ENST00000567943 TSPAN7P41732 249 aa24.62■■□□□ 1.53
FANCA-228ENST00000567943 PRLHRP49683 370 aa24.62■■□□□ 1.53
FANCA-228ENST00000567943 TPSAB1Q15661 275 aa24.62■■□□□ 1.53
FANCA-228ENST00000567943 INO80CQ6PI98 192 aaPredicted RBP24.62■■□□□ 1.53
FANCA-228ENST00000567943 NLRP9Q7RTR0 991 aa24.62■■□□□ 1.53
FANCA-228ENST00000567943 LILRA3Q8N6C8 439 aaPredicted RBP24.62■■□□□ 1.53
FANCA-228ENST00000567943 RSC1A1Q92681 617 aa24.62■■□□□ 1.53
FANCA-228ENST00000567943 UBL7Q96S82 380 aaPredicted RBP24.62■■□□□ 1.53
FANCA-228ENST00000567943 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.62■■□□□ 1.53
FANCA-228ENST00000567943 CFAP46Q8IYW2 2715 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.61■■□□□ 1.53
FANCA-228ENST00000567943 GOLGA6L10A0A0M3HER8 536 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 KLHL33A6NCF5 533 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 PHF2O75151 1096 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 TCP1P17987 556 aaKnown RBP24.61■■□□□ 1.53
FANCA-228ENST00000567943 CRADDP78560 199 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 CDK16Q00536 496 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 ACVR1Q04771 509 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 PCID2Q5JVF3 399 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 TMEM164Q5U3C3 297 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 AFTPHQ6ULP2 937 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 FAM129CQ86XR2 697 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 SPDYE1Q8NFV5 336 aaPredicted RBP24.61■■□□□ 1.53
FANCA-228ENST00000567943 CCNL2Q96S94 520 aaPredicted RBP24.61■■□□□ 1.53
FANCA-228ENST00000567943 DDA1Q9BW61 102 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 CHRAC1Q9NRG0 131 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 SLC39A1Q9NY26 324 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 BFARQ9NZS9 450 aa24.61■■□□□ 1.53
FANCA-228ENST00000567943 AP3B1O00203 1094 aa24.6■■□□□ 1.53
FANCA-228ENST00000567943 GOT2P00505 430 aaKnown RBP24.6■■□□□ 1.53
FANCA-228ENST00000567943 CD82P27701 267 aa24.6■■□□□ 1.53
FANCA-228ENST00000567943 LEPRP48357 1165 aaKnown RBP24.6■■□□□ 1.53
FANCA-228ENST00000567943 NPY2RP49146 381 aa24.6■■□□□ 1.53
FANCA-228ENST00000567943 KCNJ11Q14654 390 aa24.6■■□□□ 1.53
FANCA-228ENST00000567943 ZNF658BQ4V348 819 aaPredicted RBP24.6■■□□□ 1.53
FANCA-228ENST00000567943 ANKS6Q68DC2 871 aa24.6■■□□□ 1.53
FANCA-228ENST00000567943 ZNF534Q76KX8 674 aa24.6■■□□□ 1.53
FANCA-228ENST00000567943 PLXDC1Q8IUK5 500 aa24.6■■□□□ 1.53
FANCA-228ENST00000567943 RBM12BQ8IXT5 1001 aaKnown RBP24.6■■□□□ 1.53
FANCA-228ENST00000567943 CFAP206Q8IYR0 622 aa24.6■■□□□ 1.53
FANCA-228ENST00000567943 CLDN19Q8N6F1 224 aa24.6■■□□□ 1.53
FANCA-228ENST00000567943 OR6P1Q8NGX9 317 aa24.6■■□□□ 1.53
FANCA-228ENST00000567943 JPH3Q8WXH2 748 aaPredicted RBP24.6■■□□□ 1.53
FANCA-228ENST00000567943 TBRG4Q969Z0 631 aaKnown RBP eCLIP24.6■■□□□ 1.53
FANCA-228ENST00000567943 C9orf72Q96LT7 481 aa24.6■■□□□ 1.53
FANCA-228ENST00000567943 INSM2Q96T92 566 aaPredicted RBP24.6■■□□□ 1.53
FANCA-228ENST00000567943 IL22Q9GZX6 179 aa24.6■■□□□ 1.53
FANCA-228ENST00000567943 WWP1Q9H0M0 922 aa24.6■■□□□ 1.53
FANCA-228ENST00000567943 ACSL5Q9ULC5 683 aa24.6■■□□□ 1.53
FANCA-228ENST00000567943 CFAP20Q9Y6A4 193 aaKnown RBP24.6■■□□□ 1.53
FANCA-228ENST00000567943 POLBP06746 335 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 ANKRD34CP0C6C1 535 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 WT1P19544 449 aaPredicted RBP24.59■■□□□ 1.53
FANCA-228ENST00000567943 MGAT1P26572 445 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 CAPZBP47756 277 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 PRAMEP78395 509 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 MC2RQ01718 297 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 ITIH4Q14624 930 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 DUS1LQ6P1R4 473 aaKnown RBP24.59■■□□□ 1.53
FANCA-228ENST00000567943 LRRC8BQ6P9F7 803 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 CCDC81Q6ZN84 652 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 VASH2Q86V25 355 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 OR4L1Q8NH43 312 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 HM13Q8TCT9 377 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 PEX13Q92968 403 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 TGM7Q96PF1 710 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 SPRY4Q9C004 299 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 APMAPQ9HDC9 416 aa24.59■■□□□ 1.53
FANCA-228ENST00000567943 IMP3Q9NV31 184 aaKnown RBP24.59■■□□□ 1.53
FANCA-228ENST00000567943 SIDT1Q9NXL6 827 aaKnown RBP24.59■■□□□ 1.53
FANCA-228ENST00000567943 PIEZO2Q9H5I5 2752 aa24.58■■□□□ 1.53
FANCA-228ENST00000567943 ATXN7O15265 892 aaPredicted RBP24.58■■□□□ 1.53
FANCA-228ENST00000567943 CAPN5O15484 640 aaPredicted RBP24.58■■□□□ 1.53
FANCA-228ENST00000567943 KIF1CO43896 1103 aaKnown RBP24.58■■□□□ 1.53
FANCA-228ENST00000567943 MTHFD1P11586 935 aaKnown RBP24.58■■□□□ 1.53
FANCA-228ENST00000567943 AMD1P17707 334 aa24.58■■□□□ 1.53
FANCA-228ENST00000567943 NSG1P42857 185 aa24.58■■□□□ 1.53
FANCA-228ENST00000567943 MAGEA6P43360 314 aa24.58■■□□□ 1.53
FANCA-228ENST00000567943 FNTAP49354 379 aa24.58■■□□□ 1.53
FANCA-228ENST00000567943 PPP1CAP62136 330 aa24.58■■□□□ 1.53
FANCA-228ENST00000567943 ANKRD22Q5VYY1 191 aa24.58■■□□□ 1.53
FANCA-228ENST00000567943 RMDN2Q96LZ7 410 aa24.58■■□□□ 1.53
FANCA-228ENST00000567943 CTRCQ99895 268 aa24.58■■□□□ 1.53
FANCA-228ENST00000567943 CCM2Q9BSQ5 444 aa24.58■■□□□ 1.53
FANCA-228ENST00000567943 NEU2Q9Y3R4 380 aa24.58■■□□□ 1.53
FANCA-228ENST00000567943 BSNQ9UPA5 3926 aa24.57■■□□□ 1.52
FANCA-228ENST00000567943 C17orf113A0A1B0GUU1 675 aa24.57■■□□□ 1.52
FANCA-228ENST00000567943 AP2A2O94973 939 aa24.57■■□□□ 1.52
FANCA-228ENST00000567943 SLC35G4P0C7Q5 338 aa24.57■■□□□ 1.52
FANCA-228ENST00000567943 SARNPP82979 210 aaKnown RBP24.57■■□□□ 1.52
FANCA-228ENST00000567943 CAPRIN2Q6IMN6 1127 aaKnown RBP24.57■■□□□ 1.52
FANCA-228ENST00000567943 GRK7Q8WTQ7 553 aa24.57■■□□□ 1.52
FANCA-228ENST00000567943 CPT1BQ92523 772 aa24.57■■□□□ 1.52
FANCA-228ENST00000567943 NKD1Q969G9 470 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms