RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 DBN1Q16643 649 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 GPR33Q49SQ1 333 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 CCDC38Q502W7 563 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 DRICH1Q6PGQ1 229 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-224ENST00000556737 PRSS42Q7Z5A4 293 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 VASH2Q86V25 355 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 SERPINA9Q86WD7 417 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 PLXDC1Q8IUK5 500 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 SPDYE1Q8NFV5 336 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-224ENST00000556737 STYXQ8WUJ0 223 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 CDKN2AIPNLQ96HQ2 116 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 TGM7Q96PF1 710 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 INSM2Q96T92 566 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-224ENST00000556737 CARD6Q9BX69 1037 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 SPRY4Q9C004 299 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 ZNF768Q9H5H4 540 aaKnown RBP10.1□□□□□ -0.79
SHMT2-224ENST00000556737 APMAPQ9HDC9 416 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 CASS4Q9NQ75 786 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 SMARCAL1Q9NZC9 954 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 SLC2A6Q9UGQ3 507 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 ZNF148Q9UQR1 794 aa10.1□□□□□ -0.79
SHMT2-224ENST00000556737 CFAP20Q9Y6A4 193 aaKnown RBP10.1□□□□□ -0.79
SHMT2-224ENST00000556737 GOLGA6L10A0A0M3HER8 536 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 CCDC162PA2VCL2 907 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 CTAGE15A4D2H0 777 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 KLHL33A6NCF5 533 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 ERVH48-1M5A8F1 160 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 TOX3O15405 576 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-224ENST00000556737 CAPN5O15484 640 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-224ENST00000556737 KIF1CO43896 1103 aaKnown RBP10.09□□□□□ -0.79
SHMT2-224ENST00000556737 FGGP02679 453 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 CTAGE8P0CG41 777 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 ATP1B2P14415 290 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-224ENST00000556737 PPM1FP49593 454 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-224ENST00000556737 ACVR1Q04771 509 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 CACNG1Q06432 222 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 CCNG2Q16589 344 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 KCTD19Q17RG1 926 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-224ENST00000556737 ZRANB3Q5FWF4 1079 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 TMEM164Q5U3C3 297 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 KIAA1614Q5VZ46 1190 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 CAPRIN2Q6IMN6 1127 aaKnown RBP10.09□□□□□ -0.79
SHMT2-224ENST00000556737 PACS1Q6VY07 963 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 CCDC81Q6ZN84 652 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 LINC00523Q86TU6 105 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 CTAGE6Q86UF2 777 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 CTAGE4Q8IX94 777 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 CLDN19Q8N6F1 224 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 HEXDCQ8WVB3 486 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 NKD1Q969G9 470 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 DCUN1D1Q96GG9 259 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 C12orf66Q96MD2 445 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 ZNF778Q96MU6 729 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 RANBP9Q96S59 729 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 NAP1L3Q99457 506 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-224ENST00000556737 RAB33BQ9H082 229 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 COG4Q9H9E3 785 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 EIF2B3Q9NR50 452 aaKnown RBP10.09□□□□□ -0.79
SHMT2-224ENST00000556737 RAB6BQ9NRW1 208 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 IMP3Q9NV31 184 aaKnown RBP10.09□□□□□ -0.79
SHMT2-224ENST00000556737 SLC39A1Q9NY26 324 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 SEMA5BQ9P283 1151 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 PAK5Q9P286 719 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 FAM8A1Q9UBU6 413 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 EPHA6Q9UF33 1036 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 RIMKLBQ9ULI2 386 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 PCDHGA4Q9Y5G9 962 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 PRSS21Q9Y6M0 314 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 ATRXP46100 2492 aa10.09□□□□□ -0.79
SHMT2-224ENST00000556737 PIKFYVEQ9Y2I7 2098 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 C17orf113A0A1B0GUU1 675 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 CFAP99D6REC4 459 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 CES2O00748 559 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 DLGAP3O95886 979 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 PRB1P04280 392 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 SLC35G4P0C7Q5 338 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 RALBP11234 206 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 AMD1P17707 334 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 SH3BP2P78314 561 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 RHDQ02161 417 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 C2orf54Q08AI8 447 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 ITIH4Q14624 930 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 DCAF12Q5T6F0 453 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 TSTD2Q5T7W7 516 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 PPP1R21Q6ZMI0 780 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 ZNF534Q76KX8 674 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 PRELID2Q8N945 189 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 CCDC89Q8N998 374 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 DNAAF3Q8N9W5 541 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 LSM14AQ8ND56 463 aaKnown RBP10.08□□□□□ -0.8
SHMT2-224ENST00000556737 KLHL6Q8WZ60 621 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 TEFMQ96QE5 360 aaKnown RBP10.08□□□□□ -0.8
SHMT2-224ENST00000556737 CTRCQ99895 268 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 ASPSCR1Q9BZE9 553 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 OR52A5Q9H2C5 316 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 KIR3DX1Q9H7L2 352 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 FBXO8Q9NRD0 319 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 RNF14Q9UBS8 474 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 SLC24A2Q9UI40 661 aa10.08□□□□□ -0.8
SHMT2-224ENST00000556737 PILRAQ9UKJ1 303 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms