RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 TTYH1Q9H313 450 aaPredicted RBP8.75□□□□□ -1.01
TDP1-210ENST00000554976 EPHX3Q9H6B9 360 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 EIF2B4Q9UI10 523 aaKnown RBP8.75□□□□□ -1.01
TDP1-210ENST00000554976 FADS3Q9Y5Q0 445 aa8.75□□□□□ -1.01
TDP1-210ENST00000554976 SLC5A10A0PJK1 596 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 TMEM202A6NGA9 273 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 GOLGA8CPA6NN73 597 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 NEMP1O14524 444 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 AZIN1O14977 448 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 GFAPP14136 432 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 TNFRSF4P43489 277 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 ERVPABLB-1P60509 514 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 POM121L1PQ3SYA9 428 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 ATAT1Q5SQI0 421 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 ZNF648Q5T619 568 aaPredicted RBP8.74□□□□□ -1.01
TDP1-210ENST00000554976 AGBL4Q5VU57 503 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 ANKS6Q68DC2 871 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 ACAD11Q709F0 780 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 GOLGA7Q7Z5G4 137 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 OR2T11Q8NH01 316 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 TWIST2Q8WVJ9 160 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 ASB11Q8WXH4 323 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 GLYATL1Q969I3 302 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 COX14Q96I36 57 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 PPP1R36Q96LQ0 422 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 LENG8Q96PV6 779 aaPredicted RBP8.74□□□□□ -1.01
TDP1-210ENST00000554976 PANX3Q96QZ0 392 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 RTKNQ9BST9 563 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 MID1IP1Q9NPA3 183 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 MEI4A8MW99 385 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 K7ESM1 405 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 WNT9AO14904 365 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 PIP5K1BO14986 540 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 NPC1O15118 1278 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 SLC16A5O15375 505 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 AP1G1O43747 822 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 TRIM16O95361 564 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 ENO2P09104 434 aaPredicted RBP8.74□□□□□ -1.01
TDP1-210ENST00000554976 SLC6A12P48065 614 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 ITPRIPL2Q3MIP1 535 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 LDLRAP1Q5SW96 308 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 ERAP2Q6P179 960 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 RAB44Q7Z6P3 723 aaPredicted RBP8.74□□□□□ -1.01
TDP1-210ENST00000554976 MYO1HQ8N1T3 1032 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 CEP70Q8NHQ1 597 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 CATSPER2Q96P56 530 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 GABRG3Q99928 467 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 SLC12A9Q9BXP2 914 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 FAM126AQ9BYI3 521 aaPredicted RBP8.74□□□□□ -1.01
TDP1-210ENST00000554976 ZNF576Q9H609 170 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 DENND2DQ9H6A0 471 aaPredicted RBP8.74□□□□□ -1.01
TDP1-210ENST00000554976 SARS2Q9NP81 518 aaKnown RBP8.74□□□□□ -1.01
TDP1-210ENST00000554976 SEMA4BQ9NPR2 832 aaPredicted RBP8.74□□□□□ -1.01
TDP1-210ENST00000554976 TRPV5Q9NQA5 729 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 PDE10AQ9Y233 779 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 COQ6Q9Y2Z9 468 aa8.74□□□□□ -1.01
TDP1-210ENST00000554976 NCF1BA6NI72 391 aaPredicted RBP8.73□□□□□ -1.01
TDP1-210ENST00000554976 NCF1CA8MVU1 366 aaPredicted RBP8.73□□□□□ -1.01
TDP1-210ENST00000554976 B2RBV5 119 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 SPECC1L-ADORA2AF8WAN1 911 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 PEX11AO75192 247 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 MTX2O75431 263 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 PSIP1O75475 530 aaKnown RBP8.73□□□□□ -1.01
TDP1-210ENST00000554976 SKAP2O75563 359 aaPredicted RBP8.73□□□□□ -1.01
TDP1-210ENST00000554976 TM7SF2O76062 418 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 MLYCDO95822 493 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 OR56A5P0C7T3 313 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 ELFN1P0C7U0 828 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 IMPDH2P12268 514 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 C6P13671 934 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 ENO3P13929 434 aaPredicted RBP8.73□□□□□ -1.01
TDP1-210ENST00000554976 NCF1P14598 390 aaPredicted RBP8.73□□□□□ -1.01
TDP1-210ENST00000554976 EZRP15311 586 aaKnown RBP8.73□□□□□ -1.01
TDP1-210ENST00000554976 GPX3P22352 226 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 GDI1P31150 447 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 SOX9P48436 509 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 CTSCP53634 463 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 ELP6Q0PNE2 266 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 SP140Q13342 867 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 ADGRE1Q14246 886 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 WASHC2DQ5SRD0 308 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 OGFOD2Q6N063 350 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 LETMD1Q6P1Q0 360 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 POU5F2Q8N7G0 328 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 OR52B6Q8NGF0 335 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 RP9Q8TA86 221 aaKnown RBP8.73□□□□□ -1.01
TDP1-210ENST00000554976 MARK4Q96L34 752 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 LINC00615Q96LM1 132 aaPredicted RBP8.73□□□□□ -1.01
TDP1-210ENST00000554976 CD244Q9BZW8 370 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 POLG2Q9UHN1 485 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 STON1Q9Y6Q2 735 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 KCNE1BA0A087WTH5 132 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 UROSP10746 265 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 MTHFRP42898 656 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 GALK1P51570 392 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 SULT1C3Q6IMI6 304 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 ADGRG6Q86SQ4 1221 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 CHCHD4Q8N4Q1 142 aa8.73□□□□□ -1.01
TDP1-210ENST00000554976 ENDOVQ8N8Q3 282 aaKnown RBP8.73□□□□□ -1.01
TDP1-210ENST00000554976 ESAMQ96AP7 390 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms