RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 FBXL12Q9NXK8 326 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 GALPQ9UBC7 116 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 PPM1HQ9ULR3 514 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 IGLV3-16A0A075B6K0 115 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 BTN3A1O00481 513 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 KPNA3O00505 521 aaPredicted RBP17.21■□□□□ 0.35
HSPG2-208ENST00000471322 GPR39O43194 453 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 MAGEC1O60732 1142 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 DIAPH2O60879 1101 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 NDUFS2O75306 463 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 GFAPP14136 432 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 MPSTP25325 297 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 CD6P30203 668 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 ACSL1P33121 698 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 DHPSP49366 369 aaPredicted RBP17.21■□□□□ 0.35
HSPG2-208ENST00000471322 ELP6Q0PNE2 266 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 TTC31Q49AM3 519 aaPredicted RBP17.21■□□□□ 0.35
HSPG2-208ENST00000471322 ATP13A5Q4VNC0 1218 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 THADAQ6YHU6 1953 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 CPNE9Q8IYJ1 553 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 TRAM1L1Q8N609 369 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 PTGR2Q8N8N7 351 aaPredicted RBP17.21■□□□□ 0.35
HSPG2-208ENST00000471322 GIMAP7Q8NHV1 300 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 PIP4K2CQ8TBX8 421 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 EEF1AKMT1Q8WVE0 214 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 SLC30A3Q99726 388 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 EBF4Q9BQW3 602 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 ZSCAN5AQ9BUG6 496 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 BOCQ9BWV1 1114 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 SPATA16Q9BXB7 569 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 GPR174Q9BXC1 333 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 NMUR2Q9GZQ4 415 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 FBRSQ9HAH7 460 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 ZDHHC2Q9UIJ5 367 aa17.21■□□□□ 0.35
HSPG2-208ENST00000471322 TRPC5OSA6NMA1 111 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 CFAP99D6REC4 459 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 STX16-NPEPL1H3BU86 382 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 STX16O14662 325 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 SLC25A14O95258 325 aaPredicted RBP17.2■□□□□ 0.34
HSPG2-208ENST00000471322 OR56A5P0C7T3 313 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 MTHFD2P13995 350 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 MMP12P39900 470 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 LRRC73Q5JTD7 316 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 PMS2CLQ68D20 193 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 MAVSQ7Z434 540 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 HSD11B1LQ7Z5J1 315 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 GPSM1Q86YR5 675 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 FBXO39Q8N4B4 442 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 HDDC3Q8N4P3 179 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 FUBP1Q96AE4 644 aaKnown RBP17.2■□□□□ 0.34
HSPG2-208ENST00000471322 DCUN1D1Q96GG9 259 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 SMOC1Q9H4F8 434 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 NCDNQ9UBB6 729 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 LNPEPQ9UIQ6 1025 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 TRIM33Q9UPN9 1127 aa17.2■□□□□ 0.34
HSPG2-208ENST00000471322 IQCF5A8MTL0 148 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 SUPT3HB4E1H0 165 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 C1QTNF3-AMACRE9PGA6 284 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 UBXN8O00124 270 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 EIF3FO00303 357 aaPredicted RBP17.19■□□□□ 0.34
HSPG2-208ENST00000471322 KLK8O60259 260 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 SUPT3HO75486 399 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 SUPT7LO94864 414 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 TRIM16O95361 564 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 CBSLP0DN79 551 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 CBSP35520 551 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 CREB5Q02930 508 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 RALGDSQ12967 914 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 TUBB3Q13509 450 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 TSNQ15631 228 aaKnown RBP17.19■□□□□ 0.34
HSPG2-208ENST00000471322 PFKFB4Q16877 469 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 ZNF284Q2VY69 593 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 GPRC6AQ5T6X5 926 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.19■□□□□ 0.34
HSPG2-208ENST00000471322 ACAD11Q709F0 780 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 PARS2Q7L3T8 475 aaKnown RBP17.19■□□□□ 0.34
HSPG2-208ENST00000471322 LPCAT2Q7L5N7 544 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 ADAMTSL2Q86TH1 951 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 ZBTB2Q8N680 514 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 ZC3H10Q96K80 434 aaKnown RBP17.19■□□□□ 0.34
HSPG2-208ENST00000471322 ARRDC1-AS1Q9H2J1 176 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 DYRK4Q9NR20 520 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 KCTD5Q9NXV2 234 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 WSB2Q9NYS7 404 aaPredicted RBP17.19■□□□□ 0.34
HSPG2-208ENST00000471322 PRSS21Q9Y6M0 314 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 DCHS1Q96JQ0 3298 aa17.19■□□□□ 0.34
HSPG2-208ENST00000471322 NPEPPSL1A6NEC2 478 aa17.18■□□□□ 0.34
HSPG2-208ENST00000471322 CDC7O00311 574 aa17.18■□□□□ 0.34
HSPG2-208ENST00000471322 ELFN1P0C7U0 828 aa17.18■□□□□ 0.34
HSPG2-208ENST00000471322 T-ENOLP0DO92 83 aa17.18■□□□□ 0.34
HSPG2-208ENST00000471322 CALB2P22676 271 aa17.18■□□□□ 0.34
HSPG2-208ENST00000471322 CA5AP35218 305 aa17.18■□□□□ 0.34
HSPG2-208ENST00000471322 DRD3P35462 400 aa17.18■□□□□ 0.34
HSPG2-208ENST00000471322 ALDH18A1P54886 795 aaKnown RBP17.18■□□□□ 0.34
HSPG2-208ENST00000471322 UNC50Q53HI1 259 aa17.18■□□□□ 0.34
HSPG2-208ENST00000471322 SH2D4BQ5SQS7 431 aa17.18■□□□□ 0.34
HSPG2-208ENST00000471322 FAM46CQ5VWP2 391 aa17.18■□□□□ 0.34
HSPG2-208ENST00000471322 LAIR1Q6GTX8 287 aa17.18■□□□□ 0.34
HSPG2-208ENST00000471322 FBXL19Q6PCT2 694 aa17.18■□□□□ 0.34
HSPG2-208ENST00000471322 LIPIQ6XZB0 460 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms